Evidence map›Paper›PMID 22609824›Full record

ArticleMetabolic engineering2012

Multi-copy genes that enhance the yield of mammalian G protein-coupled receptors in Escherichia coli.

Georgios Skretas, Tomohiro Makino, Navin Varadarajan, Mark Pogson, George Georgiou

Abstract read
In one paragraph

Article in Metabolic engineering, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Second-GenerationACS synthetic biology · 2022
    Article
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  6. Article
  7. Review
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  10. Article
  11. Review
  12. Combinatorial approaches for inverse metabolic engineering applications.Computational and structural biotechnology journal · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Georgios SkretasDepartment of Chemical Engineering, The University of Texas at Austin, Austin, TX 78712, USA.
Tomohiro Makino
Navin Varadarajan
Mark Pogson
George Georgiou
The University of Texas at Austin · USNational Hellenic Research Foundation · GR

Funding

PROTEIN DISULFIDE BOND ISOMERIZATION IN E COLIR01GM055090 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI BECKWITH, JONATHAN · 1998 to 2009
$4.3M
NIGMS NIH HHS GM55090NIGMS NIH HHS R01 GM055090
6 · The paper itself

Abstract

Low yields of recombinant expression represent a major barrier to the physical characterization of membrane proteins. Here, we have identified genes that globally enhance the production of properly folded G protein-coupled receptors (GPCRs) in Escherichia coli. Libraries of bacterial chromosomal fragments were screened using two separate systems that monitor: (i) elevated fluorescence conferred by enhanced expression of GPCR-GFP fusions and (ii) increased binding of fluorescent ligand in cells producing more active receptor. Three multi-copy hits were isolated by both methods: nagD, encoding the ribonucleotide phosphatase NagD; a fragment of nlpD, encoding a truncation of the predicted lipoprotein NlpD, and the three-gene cluster ptsN-yhbJ-npr, encoding three proteins of the nitrogen phosphotransferase system. Expression of these genes resulted in a 3- to 10-fold increase in the yields of different mammalian GPCRs. Our data is consistent with the hypothesis that the expression of these genes may serve to maintain the integrity of the bacterial periplasm and to provide a favorable environment for proper membrane protein folding, possibly by inducing a fine-tuned stress response and/or via modifying the composition of the bacterial cell envelope.

Indexed as

Gene DosageGene ExpressionAnimalsEscherichia coliEscherichia coli ProteinsGenes, BacterialGreen Fluorescent ProteinsHumansLipoproteinsMultigene FamilyNucleotidasesRatsReceptors, G-Protein-CoupledRecombinant Fusion ProteinsEscherichia coli ProteinsGreen Fluorescent ProteinsLipoproteinsNagD protein, E coliNlpD protein, E coliNucleotidasesReceptors, G-Protein-CoupledRecombinant Fusion Proteins

Identifiers

PMID22609824
PMCPMC3428473
OpenAlexW2013900311

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.