Evidence map›Paper›PMID 22609354›Full record

ArticleVirology2012

Characterization of a recombinant canine coronavirus with a distinct receptor-binding (S1) domain.

Andrew D Regan, Jean K Millet, Long Ping V Tse, Zach Chillag, Vera D Rinaldi, Beth N Licitra, Edward J Dubovi, Christopher D Town, Gary R Whittaker

Abstract read
In one paragraph

Article in Virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.8field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 58 citations in OpenAlex.

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  14. The coronavirus recombination pathway.Cell host & microbe · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Andrew D ReganDepartment of Microbiology and Immunology, Veterinary Medical Center, Cornell University, Ithaca, NY 14853, United States.
Jean K Millet
Long Ping V Tse
Zach Chillag
Vera D Rinaldi
Beth N Licitra
Edward J Dubovi
Christopher D Town
Gary R Whittaker
Cornell University · USJ. Craig Venter Institute · US

Funding

TRAINING IN MOLECULAR VIROLOGY AND PATHOGENESIST32AI007618 · NIAID · CORNELL UNIVERSITY ITHACA · PI PARRISH, COLIN R. · 2000 to 2010
$1.4M
NIAID NIH HHS HHSN272200900007CNIAID NIH HHS T32 AI007618NIAID NIH HHS T32AI007618
6 · The paper itself

Abstract

Canine alphacoronaviruses (CCoV) exist in two serotypes, type I and II, both of which can cause severe gastroenteritis. Here, we characterize a canine alphacoronavirus, designated CCoV-A76, first isolated in 1976. Serological studies show that CCoV-A76 is distinct from other CCoVs, such as the prototype CCoV-1-71. Efficient replication of CCoV-A76 is restricted to canine cell lines, in contrast to the prototypical type II strain CCoV-1-71 that more efficiently replicates in feline cells. CCoV-A76 can use canine aminopeptidase N (cAPN) receptor for infection of cells, but was unable to use feline APN (fAPN). In contrast, CCoV-1-71 can utilize both. Genomic analysis shows that CCoV-A76 possesses a distinct spike, which is the result of a recombination between type I and type II CCoV, that occurred between the N- and C-terminal domains (NTD and C-domain) of the S1 subunit. These data suggest that CCoV-A76 represents a recombinant coronavirus form, with distinct host cell tropism.

Indexed as

AnimalsCatsCD13 AntigensCell LineCoronavirus, CanineDogsGenome, ViralHost SpecificityMembrane GlycoproteinsMolecular Sequence DataPhylogenyProtein Interaction Domains and MotifsProtein SubunitsReceptors, VirusRecombination, GeneticSequence Analysis, RNACD13 AntigensMembrane GlycoproteinsProtein SubunitsReceptors, VirusSpike Glycoprotein, CoronavirusViral Envelope Proteins

Identifiers

PMID22609354
PMCPMC3377836
OpenAlexW1990861513

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.