Evidence map›Paper›PMID 22609161›Full record

ArticleDevelopmental cell2012

Transcriptional dominance of Pax7 in adult myogenesis is due to high-affinity recognition of homeodomain motifs.

Vahab D Soleimani, Vincent G Punch, Yoh-ichi Kawabe, Andrew E Jones, Gareth A Palidwor, Christopher J Porter, Joe W Cross, Jaime J Carvajal, Christel E M Kockx, Wilfred F J van IJcken and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 181 citations in OpenAlex.

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39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Vahab D SoleimaniSprott Centre for Stem Cell Research, Ottawa Hospital Research Institute, and Department of Medicine, University of Ottawa, Ottawa, ON K1H 8M5, Canada.
Vincent G Punch
Yoh-ichi Kawabe
Andrew E Jones
Gareth A Palidwor
Christopher J Porter
Joe W Cross
Jaime J Carvajal
Christel E M Kockx
Wilfred F J van IJcken
Theodore J Perkins
Peter W J Rigby
Frank Grosveld
Michael A Rudnicki
Ottawa Hospital Research InstituteErasmus MC · NLInstitute of Cancer Research · GBOttawa Hospital · CAUniversity of Ottawa · CA

Funding

GENETIC REGULATION OF SKELETAL MUSCLE REPAIRR01AR044031 · NIAMS · OTTAWA HOSPITAL RESEARCH INSTITUTE · PI RUDNICKI, MICHAEL A · 1996 to 2025
$5.6M
CIHRHoward Hughes Medical InstituteMedical Research Council G0401199NIAMS NIH HHS R01 AR044031
6 · The paper itself

Abstract

Pax3 and Pax7 regulate stem cell function in skeletal myogenesis. However, molecular insight into their distinct roles has remained elusive. Using gene expression data combined with genome-wide binding-site analysis, we show that both Pax3 and Pax7 bind identical DNA motifs and jointly activate a large panel of genes involved in muscle stem cell function. Surprisingly, in adult myoblasts Pax3 binds a subset (6.4%) of Pax7 targets. Despite a significant overlap in their transcriptional network, Pax7 regulates distinct panels of genes involved in the promotion of proliferation and inhibition of myogenic differentiation. We show that Pax7 has a higher binding affinity to the homeodomain-binding motif relative to Pax3, suggesting that intrinsic differences in DNA binding contribute to the observed functional difference between Pax3 and Pax7 binding in myogenesis. Together, our data demonstrate distinct attributes of Pax7 function and provide mechanistic insight into the nonredundancy of Pax3 and Pax7 in muscle development.

Indexed as

Transcription, GeneticAmino Acid MotifsAnimalsCell DifferentiationCell ProliferationGene Expression ProfilingHomeodomain ProteinsMiceMuscle DevelopmentMuscle, SkeletalPaired Box Transcription FactorsPAX3 Transcription FactorPAX7 Transcription FactorHomeodomain ProteinsPaired Box Transcription FactorsPax3 protein, mousePAX3 Transcription FactorPax7 protein, mousePAX7 Transcription Factor

Identifiers

PMID22609161
PMCPMC3376216
OpenAlexW2072361742

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.