Evidence map›Paper›PMID 22608083›Full record

ArticleCell2012

The life history of 21 breast cancers.

Serena Nik-Zainal, Peter Van Loo, David C Wedge, Ludmil B Alexandrov, Christopher D Greenman, King Wai Lau, Keiran Raine, David Jones, John Marshall, Manasa Ramakrishna and 40 more

Erratum issued Registry-linked trialOpen access · hybridAbstract read
In one paragraph

Article in Cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT04873427 (In Situ Clonal Heterogeneity in Prostatic Diagnostic Biopsies), which is not on this map. Cited by 864 papers.

0numbers the graph read from it
0cells of the map it votes in
864citing papers in PubMed
52.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04873427 terminatednot on this mapstarted 2021, after this paper: background citation

In Situ Clonal Heterogeneity in Prostatic Diagnostic Biopsies: Impact on Prostate Cancer Evolution and Clinical Outcome. A Retrospective, Proof of Concept Study

TypeobservationalSponsorClinica Luganese MoncuccoRan2021 to 2023Enrolled40ConditionsProstate Cancer, Genetic PredispositionArmsclonal heterogeneity evaluation
3 · Its place in the literature

Who cites it

864 citing papers in PubMed, 1,513 citations in OpenAlex.

  1. Identifying Locally Recurrent Versus Second Primary Breast Cancer: Genomic Versus Clinical Criteria from Carolina Breast Cancer Study Phase III.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2026
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804 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

50 authors at 12 institutions in 8 countries.

Serena Nik-ZainalCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Peter Van Loo
David C Wedge
Ludmil B Alexandrov
Christopher D Greenman
King Wai Lau
Keiran Raine
David Jones
John Marshall
Manasa Ramakrishna
Adam Shlien
Susanna L Cooke
Jonathan Hinton
Andrew Menzies
Lucy A Stebbings
Catherine Leroy
Mingming Jia
Richard Rance
Laura J Mudie
Stephen J Gamble
Philip J Stephens
Stuart McLaren
Patrick S Tarpey
Elli Papaemmanuil
Helen R Davies
Ignacio Varela
David J McBride
Graham R Bignell
Kenric Leung
Adam P Butler
Jon W Teague
Sancha Martin
Goran Jönsson
Odette Mariani
Sandrine Boyault
Penelope Miron
Aquila Fatima
Anita Langerød
Samuel A J R Aparicio
Andrew Tutt
Anieta M Sieuwerts
Åke Borg
Gilles Thomas
Anne Vincent Salomon
Andrea L Richardson
Anne-Lise Børresen-Dale
P Andrew Futreal
Michael R Stratton
Peter J Campbell
Breast Cancer Working Group of the International Cancer Genome Consortium
Wellcome Sanger Institute · GBDana-Farber Cancer Institute · USInstitut Curie · FRKing's College London · GBOslo University Hospital · NOUniversité Claude Bernard Lyon 1 · FRBrigham and Women's Hospital · USErasmus University Rotterdam · NLLund University · SEUniversity of British Columbia · CAUniversity of Cambridge · GBUniversity of East Anglia · GB

Funding

Variation in Receptor Tyrosine Kinases and Breast Cancer RiskP50CA089393 · NCI · DANA-FARBER CANCER INSTITUTE · PI HARRIS, LYNDSAY NORINE · 2000 to 2009
$28.8M
Department of HealthNCI NIH HHS CA089393NCI NIH HHS P50 CA089393Wellcome Trust 088340Wellcome Trust 093867Wellcome Trust 098051
6 · The paper itself

Abstract

Cancer evolves dynamically as clonal expansions supersede one another driven by shifting selective pressures, mutational processes, and disrupted cancer genes. These processes mark the genome, such that a cancer's life history is encrypted in the somatic mutations present. We developed algorithms to decipher this narrative and applied them to 21 breast cancers. Mutational processes evolve across a cancer's lifespan, with many emerging late but contributing extensive genetic variation. Subclonal diversification is prominent, and most mutations are found in just a fraction of tumor cells. Every tumor has a dominant subclonal lineage, representing more than 50% of tumor cells. Minimal expansion of these subclones occurs until many hundreds to thousands of mutations have accumulated, implying the existence of long-lived, quiescent cell lineages capable of substantial proliferation upon acquisition of enabling genomic changes. Expansion of the dominant subclone to an appreciable mass may therefore represent the final rate-limiting step in a breast cancer's development, triggering diagnosis.

Indexed as

Cell Transformation, NeoplasticClonal EvolutionMutationAlgorithmsBreast NeoplasmsChromosome AberrationsFemaleHumansPoint Mutation

Identifiers

PMID22608083
PMCPMC3428864
OpenAlexW2109991075

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.