Evidence map›Paper›PMID 22594836›Full record

ArticleThe European journal of neuroscience2012

Computational molecular phenotyping of retinal sheet transplants to rats with retinal degeneration.

M J Seiler, B W Jones, R B Aramant, P B Yang, H S Keirstead, R E Marc

Abstract read
In one paragraph

Article in The European journal of neuroscience, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Retinal remodeling in human retinitis pigmentosa.Experimental eye research · 2016
    Review
  5. Article
  6. Article
  7. Review
  8. Optogenetics for retinal disorders.Journal of ophthalmic & vision research
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

M J SeilerAnatomy & Neurobiol/Reeve-Irvine Research Center, UC Irvine, Irvine, CA 92697-4265, USA.
B W Jones
R B Aramant
P B Yang
H S Keirstead
R E Marc
University of California, Irvine · USUniversity of Utah · US

Funding

University of Utah, Core Vision Research GrantP30EY014800 · NEI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI PAUL STEVEN BERNSTEIN · 2005 to 2026
$14.6M
STRUCTURAL NEUROCHEMISTRY OF RETINAL CIRCUITSR01EY002576 · NEI · UNIVERSITY OF UTAH · PI MARC, ROBERT E · 1985 to 2016
$8.0M
Retinal RemodelingR01EY015128 · NEI · UNIVERSITY OF UTAH · PI JONES, BRYAN WILLIAM · 2004 to 2021
$7.0M
CRCNS: Large-scale computational reconstruction of three-dimensional neuralR01EB005832 · NIBIB · UNIVERSITY OF UTAH · PI TASDIZEN, TOLGA · 2005 to 2008
$1.1M
NEI NIH HHS EY014800NEI NIH HHS EY015128NEI NIH HHS EY02576NEI NIH HHS P30 EY014800NEI NIH HHS R01 EY002576NEI NIH HHS R01 EY015128NIBIB NIH HHS EB005832NIBIB NIH HHS R01 EB005832
6 · The paper itself

Abstract

Retinal progenitor sheet transplants have been shown to extend neuronal processes into a degenerating host retina and to restore visual responses in the brain. The aim of this study was to identify cells involved in transplant signals to retinal degenerate hosts using computational molecular phenotyping (CMP). S334ter line 3 rats received fetal retinal sheet transplants at the age of 24-40 days. Donor tissues were incubated with slow-releasing microspheres containing brain-derived neurotrophic factor or glial cell-derived neurotrophic factor. Up to 265 days after surgery, eyes of selected rats were vibratome-sectioned through the transplant area (some slices stained for donor marker human placental alkaline phosphatase), dehydrated and embedded in Eponate, sectioned into serial ultrathin datasets and probed for rhodopsin, cone opsin, CRALBP (cellular retinaldehyde binding protein), l-glutamate, l-glutamine, glutathione, glycine, taurine, γ-aminobutyric acid (GABA) and DAPI (4',6-diamidino-2-phenylindole). In large transplant areas, photoreceptor outer segments in contact with host retinal pigment epithelium revealed rod and cone opsin immunoreactivity whereas no such staining was found in the degenerate host retina. Transplant photoreceptor layers contained high taurine levels. Glutamate levels in the transplants were higher than in the host retina whereas GABA levels were similar. The transplant inner nuclear layer showed some loss of neurons, but amacrine cells and horizontal cells were not reduced. In many areas, glial hypertrophy between the host and transplant was absent and host and transplant neuropil appeared to intermingle. CMP data indicate that horizontal cells and both glycinergic and GABAergic amacrine cells are involved in a novel circuit between transplant and host, generating alternative signal pathways between transplant and degenerating host retina.

Indexed as

AnimalsComputational BiologyFemaleGraft SurvivalHumansMaleNeural Stem CellsPhenotypeRatsRats, TransgenicRetinaRetinal Degeneration

Identifiers

PMID22594836
PMCPMC3370059
OpenAlexW1771648105

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.