Evidence map›Paper›PMID 22592861›Full record

SynthesisInflammation research : official journal of the European Histamine Research Society ... [et al.]2012

Associations between PXK and TYK2 polymorphisms and systemic lupus erythematosus: a meta-analysis.

Young Ho Lee, Sung Jae Choi, Jong Dae Ji, Gwan Gyu Song

Abstract readMeta-Analysis
PubMed Publisher
In one paragraph

Synthesis in Inflammation research : official journal of the European Histamine Research Society ... [et al.], 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. [Psoriatic arthritis : Drugs of the (near) future].Zeitschrift fur Rheumatologie · 2017
    Review
  5. [Update on kinase inhibitors].Zeitschrift fur Rheumatologie · 2016
    Review
  6. Article
  7. Review
  8. Article
  9. Genetics of the type I interferon pathway in systemic lupus erythematosus.International journal of clinical rheumatology · 2013
    Article
  10. Review
  11. Single Nucleotide Polymorphism ofAvicenna journal of medical biotechnology
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

Young Ho LeeDivision of Rheumatology, Department of Internal Medicine, Korea University Anam Hospital, Korea University College of Medicine, 126-1, Anam-dong 5 ga, Seongbuk-gu, Seoul, 136-705, Korea. lyhcgh@korea.ac.kr
Sung Jae Choi
Jong Dae Ji
Gwan Gyu Song
Korea University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveThe aim of this study was to determine whether phox homology domain containing serine/threonine kinase (PXK) and tyrosine kinase 2 (TYK2) confer susceptibility to systemic lupus erythematosus (SLE). MATERIALS AND

methodsThe authors conducted meta-analyses on associations between SLE susceptibility and the rs6445975 polymorphism of PXK and the rs2304256, rs12720270, rs280519, and rs1272036 polymorphisms of TYK2.

resultsA total of 13 separate comparisons studies were included in this meta-analysis. Meta-analysis identified an association between SLE and the 2 allele of the rs6445975 polymorphism in the overall population [odds ratio (OR) = 1.151, 95 % confidence interval (CI) = 1.086-1.291, P = 1.8E-06]. Stratification by ethnicity identified a significant association between this polymorphism and SLE in Europeans (OR = 1.198, 95 % CI = 1.118-1.285, P = 3.4E-07), but not in Asians. Meta-analysis identified a significant negative association between SLE and the 2 allele of the rs2304256 polymorphism in the overall population (OR = 0.808, 95 % CI = 0.659-0.990, P = 0.040), and a significant negative association was found in Europeans, but not in Asians.

conclusionsThis meta-analysis shows that the rs6445975 polymorphism of PXK and the rs2304256 polymorphism of TYK2 are associated with the development of SLE in Europeans.

Indexed as

Genetic Predisposition to DiseaseCase-Control StudiesHumansIntracellular Signaling Peptides and ProteinsLupus Erythematosus, SystemicNerve Tissue ProteinsPolymorphism, GeneticProtein Serine-Threonine KinasesTYK2 KinaseWhite PeopleIntracellular Signaling Peptides and ProteinsNerve Tissue ProteinsProtein Serine-Threonine KinasesPXK protein, humanTYK2 KinaseTYK2 protein, human

Identifiers

PMID22592861
OpenAlexW2006794306

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.