Evidence map›Paper›PMID 22592563›Full record

ArticleCell and tissue banking2013

Molecular integrity and global gene expression of breast and lung cancer stem cells under long-term storage and recovery.

Feridoun Karimi-Busheri, Victoria Zadorozhny, Ewa Carrier, Habib Fakhrai

Open access · hybridAbstract read
In one paragraph

Article in Cell and tissue banking, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. CD24+/CD38- as new prognostic marker for non-small cell lung cancer.Multidisciplinary respiratory medicine · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

Feridoun Karimi-BusheriStem Cell Department, NovaRx Corporation, San Diego, CA 92121, USA. fkarimi@novarx.com
Victoria Zadorozhny
Ewa Carrier
Habib Fakhrai
NovaRx (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cryopreservation is a common procedure widely used in biological and clinical sciences. Similar protocols are also applied in preserving cancer stem cells, a field with high promises and challenges. Specific cell surface membrane proteins are considered to be biomarkers of cancer stem cells and they may play a critical role in differentiating stem cells from non stem cells. We have looked at the possible effect of long-term cryopreservation on the molecular integrity of breast MCF7 and lung, A549 and H460, cancer stem cells and to assess if these cells are more sensitive to long-term storage process. We analyzed the expression of CD24 and CD38 as two potent biomarkers of lung cancer stem cells and EpCAM and ALDH that are used as biomarkers of a wide range of cancer stem cells. We also selected three genes essential for the normal functioning of the cells, Fos, MUC1, and HLA. Our results indicate a pattern of down-regulation in the expression of the genes following freezing, in particular among cell surface marker proteins. Global gene expression of the post-thaw breast and lung cancer stem cells also reveals a significant down-regulation in freeze-thaw cells independent from each other. Analyzing the canonical pathways between two populations reveals a significant alteration in the gene expression of the pathways involved in cell cycle, mitosis, and ataxia telangiectasia mutated pathways. Overall, our results indicate that current protocols for long-term storage of lung and breast cancer stem cells may substantially influence the activity and function of genes.

Indexed as

Biological Specimen BanksGene Expression ProfilingADP-ribosyl Cyclase 1Biomarkers, TumorBreast NeoplasmsCD24 AntigenCell Line, TumorCell SurvivalCryopreservationDown-Regulationfas ReceptorFemaleGene Expression Regulation, NeoplasticHumansLung NeoplasmsMucin-1ADP-ribosyl Cyclase 1Biomarkers, TumorCD24 AntigenFAS protein, humanfas ReceptorMUC1 protein, humanMucin-1

Identifiers

PMID22592563
PMCPMC3663207
OpenAlexW1988933038

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.