Evidence map›Paper›PMID 22591720›Full record

ArticleAcademic radiology2012

Semi-automatic segmentation software for quantitative clinical brain glioblastoma evaluation.

Ying Zhu, Geoffrey S Young, Zhong Xue, Raymond Y Huang, Hui You, Kian Setayesh, Hiroto Hatabu, Fei Cao, Stephen T Wong

Abstract read
In one paragraph

Article in Academic radiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. AI-assisted Segmentation Tool for Brain Tumor MR Image Analysis.Journal of imaging informatics in medicine · 2025
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Semi-automated segmentation of pre-operative low grade gliomas in magnetic resonance imaging.Cancer imaging : the official publication of the International Cancer Imaging Society · 2015
    Article
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  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ying ZhuDepartment of Systems Medicine and Bioengineering, The Methodist Hospital Research Institute, Weill Cornell Medical College, Houston, TX, USA.
Geoffrey S Young
Zhong Xue
Raymond Y Huang
Hui You
Kian Setayesh
Hiroto Hatabu
Fei Cao
Stephen T Wong

Funding

AFINITI - An Augmented System for Neuroimaging FollowupG08LM008937 · NLM · METHODIST HOSPITAL RESEARCH INSTITUTE · PI WONG, STEPHEN TC · 2007 to 2009
$508k
NLM NIH HHS G08 LM008937
6 · The paper itself

Abstract

RATIONALE AND

objectivesQuantitative measurement provides essential information about disease progression and treatment response in patients with glioblastoma multiforme (GBM). The goal of this article is to present and validate a software pipeline for semi-automatic GBM segmentation, called AFINITI (Assisted Follow-up in NeuroImaging of Therapeutic Intervention), using clinical data from GBM patients. MATERIALS AND

methodsOur software adopts the current state-of-the-art tumor segmentation algorithms and combines them into one clinically usable pipeline. Both the advantages of the traditional voxel-based and the deformable shape-based segmentation are embedded into the software pipeline. The former provides an automatic tumor segmentation scheme based on T1- and T2-weighted magnetic resonance (MR) brain data, and the latter refines the segmentation results with minimal manual input.

resultsTwenty-six clinical MR brain images of GBM patients were processed and compared with manual results. The results can be visualized using the embedded graphic user interface.

conclusionValidation results using clinical GBM data showed high correlation between the AFINITI results and manual annotation. Compared to the voxel-wise segmentation, AFINITI yielded more accurate results in segmenting the enhanced GBM from multimodality MR imaging data. The proposed pipeline could be used as additional information to interpret MR brain images in neuroradiology.

Indexed as

SoftwareSubtraction TechniqueAlgorithmsBrain NeoplasmsGlioblastomaHumansImage EnhancementImage Interpretation, Computer-AssistedMagnetic Resonance ImagingPattern Recognition, AutomatedReproducibility of ResultsSensitivity and SpecificitySoftware Validation

Identifiers

PMID22591720
PMCPMC3515056

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.