Evidence map›Paper›PMID 22585962›Full record

ArticleInfection and immunity2012

Expansion of variant diversity associated with a high prevalence of pathogen strain superinfection under conditions of natural transmission.

Massaro W Ueti, Yunbing Tan, Shira L Broschat, Elizabeth J Castañeda Ortiz, Minerva Camacho-Nuez, Juan J Mosqueda, Glen A Scoles, Matthew Grimes, Kelly A Brayton, Guy H Palmer

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Segmental Variation in a DuplicatedInfection and immunity · 2019
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Antigenic Variation in Bacterial Pathogens.Microbiology spectrum · 2016
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Massaro W UetiAnimal Diseases Research Unit, USDA-ARS, Pullman, Washington, USA.
Yunbing Tan
Shira L Broschat
Elizabeth J Castañeda Ortiz
Minerva Camacho-Nuez
Juan J Mosqueda
Glen A Scoles
Matthew Grimes
Kelly A Brayton
Guy H Palmer
Washington State University · USUniversidad Autónoma de la Ciudad de México · MXAutonomous University of Queretaro · MX

Funding

Infectious Diseases and Microbial Immunology Training ProgramT32AI007025 · NIAID · WASHINGTON STATE UNIVERSITY · PI Thomas H KAWULA, M KARIUKI NJENGA · 1985 to 2026
$7.4M
Antigenic variation in microbial transmissionR37AI044005 · NIAID · WASHINGTON STATE UNIVERSITY · PI PALMER, GUY HUGHES · 2009 to 2018
$3.3M
Antigenic variation in rickettsial transmissionR01AI044005 · NIAID · WASHINGTON STATE UNIVERSITY · PI PALMER, GUY HUGHES · 1999 to 2008
$2.4M
NIAID NIH HHS AI44005NIAID NIH HHS R01 AI044005NIAID NIH HHS R37 AI044005NIAID NIH HHS T32 AI007025Wellcome TrustWellcome Trust GR075800M
6 · The paper itself

Abstract

Superinfection occurs when a second, genetically distinct pathogen strain infects a host that has already mounted an immune response to a primary strain. For antigenically variant pathogens, the primary strain itself expresses a broad diversity of variants over time. Thus, successful superinfection would require that the secondary strain express a unique set of variants. We tested this hypothesis under conditions of natural transmission in both temperate and tropical regions where, respectively, single-strain infections and strain superinfections of the tick-borne pathogen Anaplasma marginale predominate. Our conclusion that strain superinfection is associated with a significant increase in variant diversity is supported by progressive analysis of variant composition: (i) animals with naturally acquired superinfection had a statistically significantly greater number of unique variant sequences than animals either experimentally infected with single strains or infected with a single strain naturally, (ii) the greater number of unique sequences reflected a statistically significant increase in primary structural diversity in the superinfected animals, and (iii) the increase in primary structural diversity reflected increased combinations of the newly identified hypervariable microdomains. The role of population immunity in establishing temporal and spatial patterns of infection and disease has been well established. The results of the present study, which examined strain structure under conditions of natural transmission and population immunity, support that high levels of endemicity also drive pathogen divergence toward greater strain diversity.

Indexed as

Genetic VariationSuperinfectionAnaplasma marginaleAnaplasmosisAnimalsAntigenic VariationAntigens, BacterialDNA, BacterialHumansMolecular Sequence DataPrevalenceSequence Analysis, DNAAntigens, BacterialDNA, Bacterial

Identifiers

PMID22585962
PMCPMC3416468
OpenAlexW2125509519

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.