Evidence map›Paper›PMID 22582392›Full record

ArticleThe Journal of biological chemistry2012

Regulatory domain determinants that control PKD1 activity.

Vitalyi O Rybin, Jianfen Guo, Erin Harleton, Fan Zhang, Susan F Steinberg

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Vitalyi O RybinDepartment of Pharmacology, College of Physicians and Surgeons, Columbia University, New York, New York 10032, USA.
Jianfen Guo
Erin Harleton
Fan Zhang
Susan F Steinberg
Columbia University · US

Funding

Protein kinase C-delta actions in cardiomyocytesR01HL077860 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI STEINBERG, SUSAN F · 2004 to 2013
$3.4M
PKD Isoforms in HeartR01HL112388 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CHEN, JU, STEINBERG, SUSAN F · 2012 to 2015
$2.9M
CLINICAL AND TRANSLATIONAL SCIENCE AWARDTL1RR024158 · NCRR · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GINSBERG, HENRY N · 2006 to 2011
$1.6M
NCRR NIH HHS TL1 RR024158NHLBI NIH HHS HL 77860NHLBI NIH HHS R01 HL077860NHLBI NIH HHS R01 HL112388
6 · The paper itself

Abstract

The canonical pathway for protein kinase D1 (PKD1) activation by growth factor receptors involves diacylglycerol binding to the C1 domain and protein kinase C-dependent phosphorylation at the activation loop. PKD1 then autophosphorylates at Ser(916), a modification frequently used as a surrogate marker of PKD1 activity. PKD1 also is cleaved by caspase-3 at a site in the C1-PH interdomain during apoptosis; the functional consequences of this cleavage event remain uncertain. This study shows that PKD1-Δ1-321 (an N-terminal deletion mutant lacking the C1 domain and flanking sequence that models the catalytic fragment that accumulates during apoptosis) and PKD1-CD (the isolated catalytic domain) display high basal Ser(916) autocatalytic activity and robust activity toward CREBtide (a peptide substrate) but little to no activation loop autophosphorylation and no associated activity toward protein substrates, such as cAMP-response element binding protein and cardiac troponin I. In contrast, PKD1-ΔPH (a PH domain deletion mutant) is recovered as a constitutively active enzyme, with high basal autocatalytic activity and high basal activity toward peptide and protein substrates. These results indicate that individual regions in the regulatory domain act in a distinct manner to control PKD1 activity. Finally, cell-based studies show that PKD1-Δ1-321 does not substitute for WT-PKD1 as an in vivo activator of cAMP-response element binding protein and ERK phosphorylation. Proteolytic events that remove the C1 domain (but not the autoinhibitory PH domain) limit maximal PKD1 activity toward physiologically relevant protein substrates and lead to a defect in PKD1-dependent cellular responses.

Indexed as

TRPP Cation ChannelsAnimalsApoptosisCatalytic DomainCREB-Binding ProteinEnzyme ActivationExtracellular Signal-Regulated MAP KinasesHEK293 CellsHumansMiceMutagenesisMyocardial ContractionMyocardiumNIH 3T3 CellsPhosphorylationProtein Structure, TertiaryCREB-Binding ProteinExtracellular Signal-Regulated MAP KinasesTroponin ITRPP Cation Channels

Identifiers

PMID22582392
PMCPMC3391082
OpenAlexW2046795066

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.