Evidence map›Paper›PMID 22582057›Full record

ArticleApplied and environmental microbiology2012

Natural transformation of Gallibacterium anatis.

Bodil M Kristensen, Sunita Sinha, John D Boyce, Anders M Bojesen, Joshua C Mell, Rosemary J Redfield

Abstract readEvaluation Study
In one paragraph

Article in Applied and environmental microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. The absence ofFrontiers in veterinary science · 2024
    Article
  2. Gallibacterium anatis infection in poultry: a comprehensive review.Tropical animal health and production · 2023
    Review
  3. Article
  4. Article
  5. Article
  6. A putative siderophore receptor ofFrontiers in microbiology · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. BlaCurrent microbiology · 2019
    Article
  11. DprA Is Essential for Natural Competence inFrontiers in genetics · 2019
    Article
  12. Article
  13. Efficient construction ofCanadian journal of veterinary research = Revue canadienne de recherche veterinaire · 2016
    Article
  14. Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Bodil M KristensenDepartment of Veterinary Disease Biology, University of Copenhagen, Frederiksberg, Denmark.
Sunita Sinha
John D Boyce
Anders M Bojesen
Joshua C Mell
Rosemary J Redfield

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gallibacterium anatis is a pathogen of poultry. Very little is known about its genetics and pathogenesis. To enable the study of gene function in G. anatis, we have established methods for transformation and targeted mutagenesis. The genus Gallibacterium belongs to the Pasteurellaceae, a group with several naturally transformable members, including Haemophilus influenzae. Bioinformatics analysis identified G. anatis homologs of the H. influenzae competence genes, and natural competence was induced in G. anatis by the procedure established for H. influenzae: transfer from rich medium to the starvation medium M-IV. This procedure gave reproducibly high transformation frequencies with G. anatis chromosomal DNA and with linearized plasmid DNA carrying G. anatis sequences. Both DNA types integrated into the G. anatis chromosome by homologous recombination. Targeted mutagenesis gave transformation frequencies of >2 × 10(-4) transformants CFU(-1). Transformation was also efficient with circular plasmid containing no G. anatis DNA; this resulted in the establishment of a self-replicating plasmid. Nine diverse G. anatis strains were found to be naturally transformable by this procedure, suggesting that natural competence is common and the M-IV transformation procedure widely applicable for this species. The G. anatis genome is only slightly enriched for the uptake signal sequences identified in other pasteurellaceaen genomes, but G. anatis did preferentially take up its own DNA over that of Escherichia coli. Transformation by electroporation was not effective for chromosomal integration but could be used to introduce self-replicating plasmids. The findings described here provide important tools for the genetic manipulation of G. anatis.

Indexed as

Chromosomes, BacterialDNA, BacterialMolecular Sequence DataPasteurellaceaePlasmidsSequence Analysis, DNATransformation, BacterialDNA, Bacterial

Identifiers

PMID22582057
PMCPMC3416388

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.