Evidence map›Paper›PMID 22577098›Full record

ArticleCytometry. Part A : the journal of the International Society for Analytical Cytology2012

A platinum-based covalent viability reagent for single-cell mass cytometry.

Harris G Fienberg, Erin F Simonds, Wendy J Fantl, Garry P Nolan, Bernd Bodenmiller

Abstract read
In one paragraph

Article in Cytometry. Part A : the journal of the International Society for Analytical Cytology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 113 papers.

0numbers the graph read from it
0cells of the map it votes in
113citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

113 citing papers in PubMed, 210 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. bioRxiv : the preprint server for biology · 2025
    Article
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  6. Article
  7. Review
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  18. Post-infusion CAR TNature medicine · 2022
    Article
  19. Article
  20. Review

53 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Harris G FienbergBaxter Laboratory for Stem Cell Biology, Stanford University School of Medicine, Stanford, California, USA.
Erin F Simonds
Wendy J Fantl
Garry P Nolan
Bernd Bodenmiller
Stanford University · USBaxter (United States) · US

Funding

Using a tonsil organoid system to probe conditions for the induction of protective antibody and T cell responses to influenza.U19AI057229 · NIAID · STANFORD UNIVERSITY · PI Mark Morris Davis · 2003 to 2026
$88.5M
Stanford Nanocharacterization LaboratoryU54CA119367 · NCI · STANFORD UNIVERSITY · PI AGUS, DAVID B · 2006 to 2010
$19.8M
TRIGGERING CELL DEATH IN B CELL LYMPHOMAP01CA034233 · NCI · STANFORD UNIVERSITY · PI FELSHER, DEAN W · 1985 to 2010
$19.5M
TRANS-NETWORK PROJECTSU54CA143907 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HILLIS, WILLIAM DANIEL · 2009 to 2013
$15.2M
MODELING THE ROLE OF PROGRESSION IN FOLLICULAR LYMPHOMAU54CA149145 · NCI · STANFORD UNIVERSITY · PI PLEVRITIS, SYLVIA KATINA · 2010 to 2014
$12.1M
MOLECULAR BASIS OF HOST-PARASITE INTERACTIONT32AI007328 · NIAID · STANFORD UNIVERSITY · PI JUSTIN L SONNENBURG · 1987 to 2026
$11.9M
Software & Hardware Inference Engines for Automated Determination of Primary CellR01CA130826 · NCI · STANFORD UNIVERSITY · PI NOLAN, GARRY P · 2008 to 2011
$6.7M
MECHANISTIC STUDIES IN THE BIOSYNTHESIS OF ACETYLENESF32CA009011 · NCI · BROWN UNIVERSITY · PI CASEBIER, DAVID S · 1990 to 1992
–
NCI NIH HHS 1R01CA130826NCI NIH HHS 5U54CA143907NCI NIH HHS CA 09-011NCI NIH HHS P01 CA034233NCI NIH HHS R01 CA130826NCI NIH HHS U54 CA119367NCI NIH HHS U54 CA143907NCI NIH HHS U54 CA149145NCI NIH HHS U54CA149145NHLBI NIH HHS HHSN268201000034CNHLBI NIH HHS HV-10-05(2)NIAID NIH HHS HHSN272200700038CNIAID NIH HHS T32 AI007328NIAID NIH HHS U19 AI057229
6 · The paper itself

Abstract

In fluorescence-based flow cytometry, cellular viability is determined with membrane-impermeable fluorescent reagents that specifically enter and label plasma membrane-compromised nonviable cells. A recent technological advance in flow cytometry uses antibodies conjugated to elemental metal isotopes, rather than to fluorophores, to allow signal detection by atomic mass spectrometry. Unhampered by the limitations of overlapping emission fluorescence, mass cytometry increases the number of parameters that can be measured in single cells. However, mass cytometry is unable to take advantage of current fluorescent viability dyes. An alternative methodology was therefore developed here in which the platinum-containing chemotherapy drug cisplatin was used to resolve live and dead cells by mass cytometry. In a 1-min incubation step, cisplatin preferentially labeled nonviable cells from both adherent and suspension cultures, resulting in a platinum signal quantifiable by mass cytometry. This protocol was compatible with established sample processing steps for intracellular cytometry. Furthermore, the live/dead ratios were comparable between mass- and fluorescence-based cytometry. Importantly, although cisplatin is a known DNA-damaging agent, a 1-min "pulse" of cisplatin did not induce observable DNA damage or apoptotic responses even within 6-h post-exposure. Cisplatin can therefore be used as a viability reagent for a wide range of mass cytometry protocols.

Indexed as

Cell AdhesionCell Membrane PermeabilityCell SurvivalCisplatinDNAFemaleFlow CytometryFluorescent DyesHumansMass SpectrometryPlatinumSingle-Cell AnalysisStaining and LabelingTumor Cells, CulturedCisplatinDNAFluorescent DyesPlatinum

Identifiers

PMID22577098
PMCPMC3808967
OpenAlexW2106658907

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.