Evidence map›Paper›PMID 22576848›Full record

ArticlePlant physiology2012

SMALL ACIDIC PROTEIN1 acts with RUB modification components, the COP9 signalosome, and AXR1 to regulate growth and development of Arabidopsis.

Akari Nakasone, Masayuki Fujiwara, Yoichiro Fukao, Kamal Kanti Biswas, Abidur Rahman, Maki Kawai-Yamada, Issay Narumi, Hirofumi Uchimiya, Yutaka Oono

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Interactome ofInternational journal of molecular sciences · 2023
    Article
  3. Article
  4. Article
  5. Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea.DNA research : an international journal for rapid publication of reports on genes and genomes · 2015
    Article
  6. Article
  7. The NEDD8 modification pathway in plants.Frontiers in plant science · 2014
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Akari NakasoneMedical and Biotechnological Application Division, Japan Atomic Energy Agency, Takasaki 370-1292, Japan.
Masayuki Fujiwara
Yoichiro Fukao
Kamal Kanti Biswas
Abidur Rahman
Maki Kawai-Yamada
Issay Narumi
Hirofumi Uchimiya
Yutaka Oono
Japan Atomic Energy Agency · JPNara Institute of Science and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Previously, a dysfunction of the SMALL ACIDIC PROTEIN1 (SMAP1) gene was identified as the cause of the anti-auxin resistant1 (aar1) mutant of Arabidopsis (Arabidopsis thaliana). SMAP1 is involved in the response pathway of synthetic auxin, 2,4-dichlorophenoxyacetic acid, and functions upstream of the auxin/indole-3-acetic acid protein degradation step in auxin signaling. However, the exact mechanism by which SMAP1 functions in auxin signaling remains unknown. Here, we demonstrate that SMAP1 is required for normal plant growth and development and the root response to indole-3-acetic acid or methyl jasmonate in the auxin resistant1 (axr1) mutation background. Deletion analysis and green fluorescent protein/glutathione S-transferase pull-down assays showed that SMAP1 physically interacts with the CONSTITUTIVE PHOTOMORPHOGENIC9 SIGNALOSOME (CSN) via the SMAP1 F/D region. The extremely dwarf phenotype of the aar1-1 csn5a-1 double mutant confirms the functional role of SMAP1 in plant growth and development under limiting CSN functionality. Our findings suggest that SMAP1 is involved in the auxin response and possibly in other cullin-RING ubiquitin ligase-regulated signaling processes via its interaction with components associated with RELATED TO UBIQUITIN modification.

Indexed as

2,4-Dichlorophenoxyacetic AcidAcetatesArabidopsisArabidopsis ProteinsCaulimovirusCyclopentanesGene Expression Regulation, PlantGenetic Complementation TestGlutathione TransferaseGreen Fluorescent ProteinsIndoleacetic AcidsMutationOxylipinsPhenotypePlant EpidermisPlant Roots2,4-Dichlorophenoxyacetic AcidAcetatesArabidopsis ProteinsAXR1 protein, ArabidopsisCONSTITUTIVE PHOTOMORPHOGENIC 9 protein, ArabidopsisCyclopentanesGlutathione TransferaseGreen Fluorescent Proteinsindoleacetic acidIndoleacetic Acidsmethyl jasmonateOxylipinsSMAP1 protein, ArabidopsisUbiquitins

Identifiers

PMID22576848
PMCPMC3440233
OpenAlexW2103448931

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.