ArticlePloS one2012
Global analysis of gene expression profiles in developing physic nut (Jatropha curcas L.) seeds.
Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.
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Who cites it
35 citing papers in PubMed, 100 citations in OpenAlex.
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- Genome-Wide Identification, Expression Patterns and Sugar Transport of the Physic NutInternational journal of molecular sciences · 2022Article
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- Ectopic expression of WRINKLED1 in rice improves lipid biosynthesis but retards plant growth and development.PloS one · 2022Article
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- GPR126 regulates colorectal cancer cell proliferation by mediating HDAC2 and GLI2 expression.Cancer science · 2021Article
- Overexpression of Type 1 and 2 Diacylglycerol Acyltransferase Genes (Plants (Basel, Switzerland) · 2021Article
- Identification and characterization of long non-coding RNA (lncRNA) in the developing seeds of Jatropha curcas.Scientific reports · 2020Article
- Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas.BMC genomics · 2020Article
- Genome-Wide Identification and Comparative Analysis of MYB Transcription Factor Family inPlants (Basel, Switzerland) · 2020Article
- Article
- JCDB: a comprehensive knowledge base for Jatropha curcas, an emerging model for woody energy plants.BMC genomics · 2019Article
- Analysis of genes encoding seed storage proteins (SSPs) in chickpea (Cicer arietinum L.) reveals co-expressing transcription factors and a seed-specific promoter.Functional & integrative genomics · 2019Article
- Identifying High Confidence microRNAs in the Developing Seeds of Jatropha curcas.Scientific reports · 2019Article
- Global Phosphoproteomic Analysis Reveals the Defense and Response Mechanisms ofInternational journal of molecular sciences · 2019Article
- Temporal transcriptome profiling of developing seeds reveals a concerted gene regulation in relation to oil accumulation in Pongamia (Millettia pinnata).BMC plant biology · 2018Article
- Comparative transcriptome analysis of axillary buds in response to the shoot branching regulators gibberellin A3 and 6-benzyladenine in Jatropha curcas.Scientific reports · 2017Article
- Molecular insights into photosynthesis and carbohydrate metabolism in Jatropha curcas grown under elevated COScientific reports · 2017Article
Corrections and comments
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Authors and funding
10 authors at 5 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundPhysic nut (Jatropha curcas L.) is an oilseed plant species with high potential utility as a biofuel. Furthermore, following recent sequencing of its genome and the availability of expressed sequence tag (EST) libraries, it is a valuable model plant for studying carbon assimilation in endosperms of oilseed plants. There have been several transcriptomic analyses of developing physic nut seeds using ESTs, but they have provided limited information on the accumulation of stored resources in the seeds. METHODOLOGY/PRINCIPAL
findingsWe applied next-generation Illumina sequencing technology to analyze global gene expression profiles of developing physic nut seeds 14, 19, 25, 29, 35, 41, and 45 days after pollination (DAP). The acquired profiles reveal the key genes, and their expression timeframes, involved in major metabolic processes including: carbon flow, starch metabolism, and synthesis of storage lipids and proteins in the developing seeds. The main period of storage reserves synthesis in the seeds appears to be 29-41 DAP, and the fatty acid composition of the developing seeds is consistent with relative expression levels of different isoforms of acyl-ACP thioesterase and fatty acid desaturase genes. Several transcription factor genes whose expression coincides with storage reserve deposition correspond to those known to regulate the process in Arabidopsis. CONCLUSIONS/SIGNIFICANCE: The results will facilitate searches for genes that influence de novo lipid synthesis, accumulation and their regulatory networks in developing physic nut seeds, and other oil seeds. Thus, they will be helpful in attempts to modify these plants for efficient biofuel production.
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