Evidence map›Paper›PMID 22574173›Full record

ArticlePloS one2012

Transcriptional and post-transcriptional regulation of SPAST, the gene most frequently mutated in hereditary spastic paraplegia.

Brian J Henson, Wan Zhu, Kelsey Hardaway, Jaime L Wetzel, Mihaela Stefan, Kathryn M Albers, Robert D Nicholls

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.7field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. The Role of Spastin in Axon Biology.Frontiers in cell and developmental biology · 2022
    Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Mutations in the SPAST gene causing hereditary spastic paraplegia are related to global topological alterations in brain functional networks.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2019
    Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Review
  14. The genetics of hair cell development and regeneration.Annual review of neuroscience · 2013
    Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Brian J HensonBirth Defects Laboratories, Division of Medical Genetics, Department of Pediatrics, Children's Hospital of Pittsburgh of UPMC, Pittsburgh, Pennsylvania, United States of America.
Wan Zhu
Kelsey Hardaway
Jaime L Wetzel
Mihaela Stefan
Kathryn M Albers
Robert D Nicholls
Children's Hospital of Pittsburgh · USUniversity of Pittsburgh · US

Funding

Sox11 and Functional Recovery of Sensory NeuronsR01NS059003 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ALBERS, KATHRYN MARIE · 2008 to 2012
$1.6M
The NIPA 1 protein in spastic paraplegia and developmentR01NS049417 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI NICHOLLS, ROBERT D · 2006 to 2009
$1.1M
NINDS NIH HHS NS049417NINDS NIH HHS R01 NS049417NINDS NIH HHS R01 NS059003
6 · The paper itself

Abstract

Hereditary spastic paraplegias (HSPs) comprise a group of neurodegenerative disorders that are characterized by progressive spasticity of the lower extremities, due to axonal degeneration in the corticospinal motor tracts. HSPs are genetically heterogeneous and show autosomal dominant inheritance in ∼70-80% of cases, with additional cases being recessive or X-linked. The most common type of HSP is SPG4 with mutations in the SPAST gene, encoding spastin, which occurs in 40% of dominantly inherited cases and in ∼10% of sporadic cases. Both loss-of-function and dominant-negative mutation mechanisms have been described for SPG4, suggesting that precise or stoichiometric levels of spastin are necessary for biological function. Therefore, we hypothesized that regulatory mechanisms controlling expression of SPAST are important determinants of spastin biology, and if altered, could contribute to the development and progression of the disease. To examine the transcriptional and post-transcriptional regulation of SPAST, we used molecular phylogenetic methods to identify conserved sequences for putative transcription factor binding sites and miRNA targeting motifs in the SPAST promoter and 3'-UTR, respectively. By a variety of molecular methods, we demonstrate that SPAST transcription is positively regulated by NRF1 and SOX11. Furthermore, we show that miR-96 and miR-182 negatively regulate SPAST by effects on mRNA stability and protein level. These transcriptional and miRNA regulatory mechanisms provide new functional targets for mutation screening and therapeutic targeting in HSP.

Indexed as

Gene Expression RegulationMutation RateTranscription, Genetic3' Untranslated RegionsAdenosine TriphosphatasesAnimalsBase SequenceCell LineConserved SequenceGenetic LociHumansMicroRNAsMolecular Sequence DataNuclear Respiratory Factor 1Nucleotide MotifsParaplegia3' Untranslated RegionsAdenosine TriphosphatasesMicroRNAsMirn182 microRNA, humanMIRN96 microRNA, humanNRF1 protein, humanNuclear Respiratory Factor 1PCSK6 protein, humanProprotein ConvertasesSerine EndopeptidasesSOX11 protein, humanSOXC Transcription FactorsSpastinSPAST protein, human

Identifiers

PMID22574173
PMCPMC3344893
OpenAlexW1990505469

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.