Evidence map›Paper›PMID 22573496›Full record

ArticleHuman mutation2012

Dominant-negative STAT1 SH2 domain mutations in unrelated patients with Mendelian susceptibility to mycobacterial disease.

Miyuki Tsumura, Satoshi Okada, Hidemasa Sakai, Shin'ichiro Yasunaga, Motoaki Ohtsubo, Takuji Murata, Hideto Obata, Takahiro Yasumi, Xiao-Fei Kong, Avinash Abhyankar and 11 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Human mutation, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed, 2 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 2 syntheses or guidelines pooled it, 84 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
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  5. Article
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  7. Article
  8. Article
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  10. Review
  11. Case report: A novelFrontiers in immunology · 2024
    Article
  12. Review
  13. Inherited human ZNF341 deficiency.Current opinion in immunology · 2023
    Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. IL-2 Signaling Axis Defects: How Many Faces?Frontiers in pediatrics · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 9 institutions in 4 countries.

Miyuki TsumuraDepartment of Pediatrics, Hiroshima University Graduate School of Biomedical Sciences, Hiroshima, Japan.
Satoshi Okada
Hidemasa Sakai
Shin'ichiro Yasunaga
Motoaki Ohtsubo
Takuji Murata
Hideto Obata
Takahiro Yasumi
Xiao-Fei Kong
Avinash Abhyankar
Toshio Heike
Tatsutoshi Nakahata
Ryuta Nishikomori
Saleh Al-Muhsen
Stéphanie Boisson-Dupuis
Jean-Laurent Casanova
Mofareh Alzahrani
Mohammed Al Shehri
Geyhad Elghazali
Yoshihiro Takihara
Masao Kobayashi
Kyoto University · JPHiroshima University · JPRockefeller University · USKing Fahd Medical City · SADélégation Paris 5 · FRKing Saud University · SAMolina Center for Energy and the Environment · USOsaka Medical and Pharmaceutical University · JPOsaka University · JP

Funding

TRANSFORMING TRANSLATIONAL SCIENCE AND EDUCATION TO BENEFIT HUMAN HEALTHUL1RR024143 · NCRR · ROCKEFELLER UNIVERSITY · PI COLLER, BARRY · 2006 to 2011
$49.1M
Genome-Wide Dissection of Mendelian Susceptibility to Mycobacterial DiseaseR37AI095983 · NIAID · ROCKEFELLER UNIVERSITY · PI CASANOVA, JEAN-LAURENT · 2011 to 2020
$4.6M
A genetic dissection of Mendelian susceptibility to mycobacterial diseases (MSMD)R01AI089970 · NIAID · ROCKEFELLER UNIVERSITY · PI CASANOVA, JEAN-LAURENT · 2010 to 2014
$2.5M
NCRR NIH HHS 5UL1RR024143-03NCRR NIH HHS UL1 RR024143NIAID NIH HHS 1R01AI089970-01NIAID NIH HHS R01 AI089970NIAID NIH HHS R37 AI095983
6 · The paper itself

Abstract

Patients carrying two loss-of-function (or hypomorphic) alleles of STAT1 are vulnerable to intracellular bacterial and viral diseases. Heterozygosity for loss-of-function dominant-negative mutations in STAT1 is responsible for autosomal dominant (AD) Mendelian susceptibility to mycobacterial disease (MSMD), whereas heterozygosity for gain-of-function loss-of-dephosphorylation mutations causes AD chronic mucocutaneous candidiasis (CMC). The two previously reported types of AD MSMD-causing STAT1 mutations are located in the tail segment domain (p.L706S) or in the DNA-binding domain (p.E320Q and p.Q463H), whereas the AD CMC-causing mutations are located in the coiled-coil domain. We identified two cases with AD-STAT1 deficiency in two unrelated patients from Japan and Saudi Arabia carrying heterozygous missense mutations affecting the SH2 domain (p.K637E and p.K673R). p.K673R is a hypomorphic mutation that impairs STAT1 tyrosine phosphorylation, whereas the p.K637E mutation is null and affects both STAT1 phosphorylation and DNA-binding activity. Both alleles are dominant negative and result in impaired STAT1-mediated cellular responses to interferon (IFN)-γ and IL-27. In contrast, STAT1-mediated cellular responses against IFN-α and IFN-λ1 were preserved at normal levels in patients' cells. We describe here the first dominant mutations in the SH2 domain of STAT1, revealing the importance of this domain for tyrosine phosphorylation and DNA binding, as well as for antimycobacterial immunity.

Indexed as

Mutation, Missensesrc Homology DomainsActive Transport, Cell NucleusAllelesBCG VaccineChildCytokinesDisease SusceptibilityDNA Mutational AnalysisFemaleGenes, DominantHumansInfantInterferon-alphaInterferon-gammaInterleukinsBCG VaccineCytokinesInterferon-alphaInterferon-gammaInterleukinsSTAT1 protein, humanSTAT1 Transcription FactorTyrosine

Identifiers

PMID22573496
PMCPMC3668973
OpenAlexW2049234640

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.