Evidence map›Paper›PMID 22572939›Full record

ArticlePlant molecular biology2012

AtIQM1, a novel calmodulin-binding protein, is involved in stomatal movement in Arabidopsis.

Yu-Ping Zhou, Jun Duan, Takahiro Fujibe, Kotaro T Yamamoto, Chang-En Tian

Abstract read
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Proteomic Profiling of Plant and Pathogen Interaction on the Leaf Epidermis.International journal of molecular sciences · 2022
    Article
  6. The calcium signaling module CaM-IQM destabilizes IAA-ARF interaction to regulate callus and lateral root formation.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Review
  8. Genome-wide identification and analysis of theFrontiers in plant science · 2022
    Article
  9. Genome-Wide Analysis of thePlants (Basel, Switzerland) · 2021
    Article
  10. Article
  11. Article
  12. The Plant cell · 2020
    Article
  13. Article
  14. Article
  15. The malate-activated ALMT12 anion channel in the grassThe Journal of biological chemistry · 2019
    Article
  16. Frontiers in plant science · 2018
    Article
  17. Article
  18. Article
  19. Genome-wide analysis of the IQD gene family in maize.Molecular genetics and genomics : MGG · 2016
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Yu-Ping ZhouGuangzhou Key Laboratory for Functional Study on Plant Stress-Resistant Genes, Guangzhou University, Guangzhou, 510006, China.
Jun Duan
Takahiro Fujibe
Kotaro T Yamamoto
Chang-En Tian
Guangzhou University · CNHokkaido University · JPSouth China Botanical Garden · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We recently identified a novel IQ motif-containing protein family, IQM, which shares sequence homology with a pea heavy metal-induced protein 6 and a ribosome inactivating protein, trichosanthin. Distinct expression patterns for each gene suggest that each IQM family member may play a different role in plant development and response to environmental cues. However functions of the IQM family members remain to be analyzed. IQM1 bound with calmodulin 5 (CaM5) in yeast two-hybrid assay via its IQ-motif. The CaM binding was Ca(2+)-independent in vitro, and was also observed in bimolecular fluorescence complementation analyses in onion epidermal cells. IQM1 was found to express strongly in guard cells and the cortex of roots. The T-DNA insertion mutants of IQM1 displayed a smaller stomatal aperture, a decreased water loss rate and a shorter primary root. Moreover, iqm1 did not change its stomatal aperture when treated with light, dark, ABA and chitin obviously. Microarray analyses showed that 243 and 28 genes were up- and down-regulated by more than twofold in iqm1-1, respectively. Interesting, 34 of 117 and 7 of 30 chitin-responsive transcriptional factor and ubiquitin ligase genes were up-regulated, respectively. Stomatal guard cells of iqm1-1 also showed enhanced expression of genes involved in production and signaling of reactive oxygen species (ROS). Consistently, increased ROS level was observed in the iqm1 guard cells.

Indexed as

ArabidopsisArabidopsis ProteinsCalcium SignalingCalmodulin-Binding ProteinsChitinDNA, BacterialFungiGene Expression ProfilingGenes, PlantMovementMutagenesis, InsertionalPlant StomataProtein Interaction Domains and MotifsReactive Oxygen SpeciesSignal TransductionTwo-Hybrid System TechniquesArabidopsis ProteinsCalmodulin-Binding ProteinsChitinDNA, BacterialReactive Oxygen SpeciesT-DNA

Identifiers

PMID22572939
OpenAlexW2052370382

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.