Evidence map›Paper›PMID 22570707›Full record

ArticlePloS one2012

A novel human polycomb binding site acts as a functional polycomb response element in Drosophila.

Suresh Cuddapah, Tae-Young Roh, Kairong Cui, Cynthia C Jose, Margaret T Fuller, Keji Zhao, Xin Chen

Abstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Review
  11. Article
  12. A dimeric state for PRC2.Nucleic acids research · 2014
    Article
  13. Article
  14. Article
  15. Article
  16. Promiscuous RNA binding by Polycomb repressive complex 2.Nature structural & molecular biology · 2013
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Suresh CuddapahDepartment of Environmental Medicine, New York University School of Medicine, New York, New York, USA. Suresh.Cuddapah@nyumc.org
Tae-Young Roh
Kairong Cui
Cynthia C Jose
Margaret T Fuller
Keji Zhao
Xin Chen

Funding

Genome-wide mapping of histone modificationsZIAHL005801 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI ZHAO, KEJI · 2009 to 2025
$24.0M
Epigenetic Regulation of Hematopoietic Stem CellsZIAHL006031 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI ZHAO, KEJI · 2009 to 2025
$16.6M
Regulation of Spermatocyte Transcription by Testis TAFSR01GM061986 · NIGMS · STANFORD UNIVERSITY · PI FULLER, MARGARET T · 2000 to 2017
$5.1M
Epigenetic Regulation of Germ Cell Differentiation from a Stem Cell LineageR01HD065816 · NICHD · JOHNS HOPKINS UNIVERSITY · PI CHEN, XIN · 2011 to 2015
$1.6M
Epigenetic Regulation of Germ Cell Differentiation from a Stem Cell LineageR00HD055052 · NICHD · JOHNS HOPKINS UNIVERSITY · PI CHEN, XIN · 2008 to 2010
$745k
Epigenetic Regulation of Germ Cell Differentiation from a Stem Cell LineageK99HD055052 · NICHD · STANFORD UNIVERSITY · PI CHEN, XIN · 2007 to 2008
$98k
Intramural NIH HHSNICHD NIH HHS 1R01HD065816NICHD NIH HHS K99 HD055052NICHD NIH HHS K99/R00 HD055052NICHD NIH HHS R00 HD055052NICHD NIH HHS R01 HD065816NIGMS NIH HHS 1R01GM61986NIGMS NIH HHS R01 GM061986
6 · The paper itself

Abstract

Polycomb group (PcG) proteins are key chromatin regulators implicated in multiple processes including embryonic development, tissue homeostasis, genomic imprinting, X-chromosome inactivation, and germ cell differentiation. The PcG proteins recognize target genomic loci through cis DNA sequences known as Polycomb Response Elements (PREs), which are well characterized in Drosophila. However, mammalian PREs have been elusive until two groups reported putative mammalian PREs recently. Consistent with the existence of mammalian PREs, here we report the identification and characterization of a potential PRE from human T cells. The putative human PRE has enriched binding of PcG proteins, and such binding is dependent on a key PcG component SUZ12. We demonstrate that the putative human PRE carries both genetic and molecular features of Drosophila PRE in transgenic flies, implying that not only the trans PcG proteins but also certain features of the cis PREs are conserved between mammals and Drosophila.

Indexed as

Response ElementsAnimalsAnimals, Genetically ModifiedBinding SitesCell Cycle ProteinsCell LineDrosophilaGene Expression RegulationGenes, ReporterHumansPolycomb-Group ProteinsTranscription, GeneticCell Cycle ProteinsPolycomb-Group ProteinsPRC1 protein, human

Identifiers

PMID22570707
PMCPMC3343078

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.