Evidence map›Paper›PMID 22566966›Full record

ArticleFrontiers in immunology2012

Insights into T cell recognition of antigen: significance of two-dimensional kinetic parameters.

Lindsay J Edwards, Veronika I Zarnitsyna, Jennifer D Hood, Brian D Evavold, Cheng Zhu

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

  1. Mathematical models of TCR initial triggering.Frontiers in immunology · 2024
    Review
  2. B cell receptors and free antibodies have different antigen-binding kinetics.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  3. Defining and Studying B Cell Receptor and TCR Interactions.Journal of immunology (Baltimore, Md. : 1950) · 2023
    Article
  4. Article
  5. Relationship of 2D Affinity to T Cell Functional Outcomes.International journal of molecular sciences · 2020
    Review
  6. Article
  7. Article
  8. Mechanosensing drives acuity ofProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  9. Supported lipid bilayer platforms to probe cell mechanobiology.Biochimica et biophysica acta. Biomembranes · 2017
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Lindsay J EdwardsDepartment of Microbiology and Immunology, Emory University Atlanta, GA, USA.
Veronika I Zarnitsyna
Jennifer D Hood
Brian D Evavold
Cheng Zhu
Emory University · USGeorgia Institute of Technology · USThe Wallace H. Coulter Department of Biomedical Engineering · US

Funding

CD4+ T cell affinity for self and foreign antigens in the CNSR01NS071518 · NINDS · UNIVERSITY OF UTAH · PI EVAVOLD, BRIAN D · 2010 to 2021
$3.3M
Negative Regulatory Mechanisms for Myelin Specific T cellsR01NS062358 · NINDS · EMORY UNIVERSITY · PI EVAVOLD, BRIAN D · 2009 to 2013
$1.4M
Statistical Modeling of Receptor/Ligand Binding Kinetics on the T cell SurfaceR01GM096187 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI WU, CHIEN-FU JEFF · 2010 to 2012
$879k
NIGMS NIH HHS R01 GM096187NINDS NIH HHS R01 NS062358NINDS NIH HHS R01 NS071518
6 · The paper itself

Abstract

The T cell receptor (TCR) interacts with peptide-major histocompatibility complex (pMHC) to enable T cell development and trigger adaptive immune responses. For this reason, TCR:pMHC interactions have been intensely studied for over two decades. However, the details of how various binding parameters impact T cell activation remain elusive. Most measurements were made using recombinant proteins by surface plasmon resonance, a three-dimensional (3D) technique in which fluid-phase receptors and ligands are removed from their cellular environment. This approach found TCR:pMHC interactions with relatively low affinities and slow off-rates for agonist peptides. Newer generation techniques have analyzed TCR:pMHC interactions in two dimensions (2D), with both proteins anchored in apposing plasma membranes. These approaches reveal in situ TCR:pMHC interaction kinetics that are of high affinity and exhibit rapid on- and off-rates upon interaction with agonist ligands. Importantly, 2D binding parameters correlate better with T cell functional responses to a spectrum of ligands than 3D measures.

Indexed as

2D bindingaffinitykineticsmolecular interactionT cell activation

Identifiers

PMID22566966
PMCPMC3342060
OpenAlexW2160893240

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.