Evidence map›Paper›PMID 22566654›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Depolymerization dynamics of individual filaments of bacterial cytoskeletal protein FtsZ.

Pablo Mateos-Gil, Alfonso Paez, Ines Hörger, Germán Rivas, Miguel Vicente, Pedro Tarazona, Marisela Vélez

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Review
  3. Dynamic Assembly/Disassembly ofInternational journal of molecular sciences · 2021
    Article
  4. A stochastic model for dynamics of FtsZ filaments and the formation of Z -ring.The European physical journal. E, Soft matter · 2020
    Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Defining the rate-limiting processes of bacterial cytokinesis.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  14. Article
  15. FtsZ filament capping by MciZ, a developmental regulator of bacterial division.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  16. Article
  17. Article
  18. Review
  19. MinCDE exploits the dynamic nature of FtsZ filaments for its spatial regulation.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Pablo Mateos-GilInstituto de Ciencia de Materiales Nicolás Cabrera, C-8, Universidad Autónoma de Madrid, 28049 Madrid, Spain.
Alfonso Paez
Ines Hörger
Germán Rivas
Miguel Vicente
Pedro Tarazona
Marisela Vélez

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report observation and analysis of the depolymerization filaments of the bacterial cytoskeletal protein FtsZ (filament temperature-sensitive Z) formed on a mica surface. At low concentration, proteins adsorbed on the surface polymerize forming curved filaments that close into rings that remain stable for some time before opening irreversibly and fully depolymerizing. The distribution of ring lifetimes (T) as a function of length (N), shows that the rate of ring aperture correlates with filament length. If this ring lifetime is expressed as a bond survival time, (T(b) ≡ NT), this correlation is abolished, indicating that these rupture events occur randomly and independently at each monomer interface. After rings open irreversibly, depolymerization of the remaining filaments is fast, but can be slowed down and followed using a nonhydrolyzing GTP analogue. The histogram of depolymerization velocities of individual filaments has an asymmetric distribution that can be fit with a computer model that assumes two rupture rates, a slow one similar to the one observed for ring aperture, affecting monomers in the central part of the filaments, and a faster one affecting monomers closer to the open ends. From the quantitative analysis, we conclude that the depolymerization rate is affected both by nucleotide hydrolysis rate and by its exchange along the filament, that all monomer interfaces are equally competent for hydrolysis, although depolymerization is faster at the open ends than in central filament regions, and that all monomer-monomer interactions, regardless of the nucleotide present, can adopt a curved configuration.

Indexed as

Models, ChemicalAluminum SilicatesBacterial ProteinsCell DivisionComputer SimulationCytoskeletal ProteinsCytoskeletonEscherichia coliEscherichia coli ProteinsGuanosine TriphosphateHydrolysisMicroscopy, Atomic ForcePolymerizationProtein Interaction Domains and MotifsAluminum SilicatesBacterial ProteinsCytoskeletal ProteinsEscherichia coli ProteinsFtsZ protein, BacteriaGuanosine Triphosphatemica

Identifiers

PMID22566654
PMCPMC3361441

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.