ArticleFunctional ecology2012
Transcriptome profiles link environmental variation and physiological response of Mytilus californianus between Pacific tides.
Article in Functional ecology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- Spatially Varying Selection Amplifies Intrapopulation Differentiation Among Phenotypic Traits in the Rocky-Shore Mussel,Ecology and evolution · 2025Article
- Comparative Transcriptomic Analyses Reveal Differences in the Responses of Diploid and Triploid Eastern Oysters to Environmental Stress.Evolutionary applications · 2024Article
- Epibiont communities on mussels in relation to parasitism and location in the rocky intertidal zone.FEMS microbiology ecology · 2024Article
- Interactions Between Temperature Variability and Reproductive Physiology Across Traits in an Intertidal Crab.Frontiers in physiology · 2022Article
- Comparative Transcriptome and DNA Methylation Analysis of Phenotypic Plasticity in the Pacific Abalone (Frontiers in physiology · 2021Article
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- Genome-wide identification and characterization of the AMPK genes and their distinct expression patterns in response to air exposure in the Manila clam (Ruditapes philippinarum).Genes & genomics · 2020Article
- Modulated Expression and Activities ofFrontiers in physiology · 2020Article
- Transcriptomics and Fitness Data Reveal Adaptive Plasticity of Thermal Tolerance in Oysters Inhabiting Different Tidal Zones.Frontiers in physiology · 2018Article
- High throughput sequencing of RNA transcriptomes in Ruditapes philippinarum identifies genes involved in osmotic stress response.Scientific reports · 2017Article
- Physiological performance of the intertidal Manila clam (Ruditapes philippinarum) to long-term daily rhythms of air exposure.Scientific reports · 2017Article
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- A skellam model to identify differential patterns of gene expression induced by environmental signals.BMC genomics · 2014Article
- Assembly and annotation of a non-model gastropod (Nerita melanotragus) transcriptome: a comparison of de novo assemblers.BMC research notes · 2014Article
- Bivalve omics: state of the art and potential applications for the biomonitoring of harmful marine compounds.Marine drugs · 2013Review
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Corrections and comments
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Authors and funding
3 authors.
Funding
Abstract
summaryThe marine intertidal zone is characterized by large variation in temperature, pH, dissolved oxygen and the supply of nutrients and food on seasonal and daily time scales. These oceanic fluctuations drive of ecological processes such as recruitment, competition and consumer-prey interactions largely via physiological mehcanisms. Thus, to understand coastal ecosystem dynamics and responses to climate change, it is crucial to understand these mechanisms.Here we utilize transcriptome analysis of the physiological response of the mussel Mytilus californianus at different spatial scales to gain insight into these mechanisms. We used mussels inhabiting different vertical locations within Strawberry Hill on Cape Perpetua, OR and Boiler Bay on Cape Foulweather, OR to study inter- and intra-site variation of gene expression.The results highlight two distinct gene expression signatures related to the cycling of metabolic activity and perturbations to cellular homeostasis. Intermediate spatial scales show a strong influence of oceanographic differences in food and stress environments between sites separated by ~65 km.Together, these new insights into environmental control of gene expression may allow understanding of important physiological drivers within and across populations.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.