Evidence map›Paper›PMID 22562447›Full record

ArticleJournal of clinical immunology2012

Clinical, functional and genetic analysis of twenty-four patients with chronic granulomatous disease - identification of eight novel mutations in CYBB and NCF2 genes.

Cécile Martel, Michelle Mollin, Sylvain Beaumel, Jean Paul Brion, Charles Coutton, Véronique Satre, Gaëlle Vieville, Mary Callanan, Christine Lefebvre, Alexandra Salmon and 27 more

Erratum issuedAbstract readCase Reports
PubMed Publisher
In one paragraph

Article in Journal of clinical immunology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Autoimmunity in Primary Immunodeficiencies (PID).Clinical reviews in allergy & immunology · 2023
    Review
  3. Variant Type X91Journal of clinical immunology · 2022
    Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

  • Erratum issued
    Mansour, Lamia Sfaihi Ben [corrected to Sfaihi, Lamia]
5 · Who and what money

Authors and funding

37 authors at 20 institutions in 6 countries.

Cécile MartelChronic Granulomatous Disease Diagnosis and Research Centre (CDiReC), Pôle Biologie, CHU de Grenoble, Grenoble, 38043, France.
Michelle Mollin
Sylvain Beaumel
Jean Paul Brion
Charles Coutton
Véronique Satre
Gaëlle Vieville
Mary Callanan
Christine Lefebvre
Alexandra Salmon
Anne Pagnier
Dominique Plantaz
Cécile Bost-Bru
Laurence Eitenschenck
Isabelle Durieu
Daniel Floret
Claire Galambrun
Hervé Chambost
Gérard Michel
Jean-Louis Stephan
Olivier Hermine
Stéphane Blanche
Nathalie Blot
Hervé Rubié
Guillaume Pouessel
Stephanie Drillon-Haus
Bernard Conrad
Klara M Posfay-Barbe
Zuzana Havlicekova
Tamara Voskresenky-Baricic
Kelecic Jadranka
Maria Cristina Arriazu
Luis Alberto Garcia
Lamia Sfaihi
Lamia Sfaihi Ben Mansour
Pierre Bordigoni
Marie José Stasia
Centre Hospitalier Universitaire de Grenoble · FRHôpital d'Enfants · FRAssistance Publique – Hôpitaux de Paris · FRHospital Privado de Comunidad · ARAnthogyr (France) · FRBoiron (France) · FRCentre Hospitalier de Roubaix · FRCentre Hospitalier Universitaire de Toulouse · FRComenius University Bratislava · SKHôpital Couple Enfant · FRHôpital d'Hautepierre · FRHôpital Femme Mère Enfant · FRHôpital Lyon Sud · FRHôpital Nord · FRHopital Universitaire Hedi Chaker · TNInserm · FRSisters of Charity Hospital · HRTranslational Innovation in Medicine and Complexity · FRUniversity Hospital Centre Zagreb · HRUniversity Hospital of Geneva · CH

Funding

PRIMARY IMMUNODEFICIENCY DISEASE REGISTRY-266030070-266030070N01AI030070 · NIAID · PIRC, INC. · 2003 to 2005
–
NIAID NIH HHS N01-AI-30070
6 · The paper itself

Abstract

Chronic granulomatous disease is an inherited disorder in which phagocytes lack a functional NADPH oxidase and cannot produce superoxide anions. The most common form is caused by mutations in CYBB encoding gp91phox. We investigated 24 CGD patients and their families. Twenty-one mutations in CYBB were classified as X91(0), X91(+) or X91(-) variants according to cytochrome b (558) expression. Point mutations in encoding regions represented 50 % of the mutations found in CYBB, splice site mutations 27 %, deletions and insertions 23 %. Eight mutations in CYBB were novel leading to X91(0)CGD cases. Two of these were point mutations: c493G>T and a double mutation c625C>G in exon 6 and c1510C>T in exon 12 leading to a premature stop codon at Gly165 in gp91phox and missense mutations His209Arg/Thr503Ile respectively. Two novel splice mutations in 5'intronic regions of introns 1 and 6 were found. A novel deletion/insertion c1024_1026delCTG/insT results in a frameshift introducing a stop codon at position 346 in gp91phox. The last novel mutation was the insertion of a T at c1373 leading to a frameshift and a premature stop codon at position 484 in gp91phox. For the first time the precise size of two large mutations in CYBB was determined by array-comparative genomic hybridization and carriers' status were evaluated by multiplex ligation-dependent probe amplification assay. No clear correlation between clinical severity and CYBB mutations could be established. Of three mutations in CYBA, NCF1 and NCF2 leading to rare autosomal recessive CGD, one nonsense mutation c29G>A in exon 1 of NCF2 was new.

Indexed as

ChildChild, PreschoolFemaleGranulomatous Disease, ChronicHumansInfantMaleMembrane GlycoproteinsMutationNADPH Oxidase 2NADPH OxidasesCYBB protein, humanMembrane GlycoproteinsNADPH Oxidase 2NADPH OxidasesNCF2 protein, human

Identifiers

PMID22562447
OpenAlexW2027094818

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.