Evidence map›Paper›PMID 22562358›Full record

ArticleAge (Dordrecht, Netherlands)2013

The Drosophila orthologue of progeroid human WRN exonuclease, DmWRNexo, cleaves replication substrates but is inhibited by uracil or abasic sites : analysis of DmWRNexo activity in vitro.

Penelope A Mason, Ivan Boubriak, Timothy Robbins, Ralph Lasala, Robert Saunders, Lynne S Cox

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Age (Dordrecht, Netherlands), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Penelope A MasonDepartment of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK. penelope.mason@bioch.ox.ac.uk
Ivan Boubriak
Timothy Robbins
Ralph Lasala
Robert Saunders
Lynne S Cox
University of Oxford · GBHong Kong Metropolitan University · HK

Funding

Biotechnology and Biological Sciences Research Council BB/E000924/1Biotechnology and Biological Sciences Research Council BB/E002072/1
6 · The paper itself

Abstract

Werner syndrome (WS) is a rare late-onset premature ageing disease showing many of the phenotypes associated with normal ageing, and provides one of the best models for investigating cellular pathways that lead to normal ageing. WS is caused by mutation of WRN, which encodes a multifunctional DNA replication and repair helicase/exonuclease. To investigate the role of WRN protein's unique exonuclease domain, we have recently identified DmWRNexo, the fly orthologue of the exonuclease domain of human WRN. Here, we fully characterise DmWRNexo exonuclease activity in vitro, confirming 3'-5' polarity, demonstrating a requirement for Mg(2+), inhibition by ATP, and an ability to degrade both single-stranded DNA and duplex DNA substrates with 3' or 5' overhangs, or bubble structures, but with no activity on blunt ended DNA duplexes. We report a novel active site mutation that ablates enzyme activity. Lesional substrates containing uracil are partially cleaved by DmWRNexo, but the enzyme pauses on such substrates and is inhibited by abasic sites. These strong biochemical similarities to human WRN suggest that Drosophila can provide a valuable experimental system for analysing the importance of WRN exonuclease in cell and organismal ageing.

Indexed as

Gene Expression RegulationAnimalsCatalytic DomainDNA ReplicationDNA, Single-StrandedDrosophilaDrosophila ProteinsExodeoxyribonucleasesExonucleasesHumansPhenotypeRecQ HelicasesSequence Analysis, DNAUracilWerner SyndromeWerner Syndrome HelicaseDNA, Single-StrandedDrosophila ProteinsExodeoxyribonucleasesExonucleasesRecQ HelicasesUracilWerner Syndrome HelicaseWRNexo protein, DrosophilaWRN protein, human

Identifiers

PMID22562358
PMCPMC3636389
OpenAlexW2072468275

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.