Evidence map›Paper›PMID 22560079›Full record

ArticleCell stem cell2012

NuRD suppresses pluripotency gene expression to promote transcriptional heterogeneity and lineage commitment.

Nicola Reynolds, Paulina Latos, Antony Hynes-Allen, Remco Loos, Donna Leaford, Aoife O'Shaughnessy, Olukunbi Mosaku, Jason Signolet, Philip Brennecke, Tüzer Kalkan and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Cell stem cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 146 papers.

0numbers the graph read from it
0cells of the map it votes in
146citing papers in PubMed
12.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

146 citing papers in PubMed, 237 citations in OpenAlex.

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86 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 3 countries.

Nicola ReynoldsWellcome Trust Centre for Stem Cell Research, University of Cambridge, Tennis Court Road, Cambridge CB2 1QR, UK.
Paulina Latos
Antony Hynes-Allen
Remco Loos
Donna Leaford
Aoife O'Shaughnessy
Olukunbi Mosaku
Jason Signolet
Philip Brennecke
Tüzer Kalkan
Ita Costello
Peter Humphreys
William Mansfield
Kentaro Nakagawa
John Strouboulis
Axel Behrens
Paul Bertone
Brian Hendrich
Wellcome/MRC Cambridge Stem Cell Institute · GBUniversity of Cambridge · GBThe Honourable Society of Lincoln's Inn · GBAlexander Fleming Biomedical Sciences Research Center · GREuropean Bioinformatics Institute · GBMRC Centre for Regenerative Medicine · GB

Funding

Biotechnology and Biological Sciences Research CouncilCancer Research UK 15679Medical Research Council G0600275Medical Research Council G0800784Medical Research Council G1000847Wellcome Trust 079249Wellcome Trust 098021
6 · The paper itself

Abstract

Transcriptional heterogeneity within embryonic stem cell (ESC) populations has been suggested as a mechanism by which a seemingly homogeneous cell population can initiate differentiation into an array of different cell types. Chromatin remodeling proteins have been shown to control transcriptional variability in yeast and to be important for mammalian ESC lineage commitment. Here we show that the Nucleosome Remodeling and Deacetylation (NuRD) complex, which is required for ESC lineage commitment, modulates both transcriptional heterogeneity and the dynamic range of a set of pluripotency genes in ESCs. In self-renewing conditions, the influence of NuRD at these genes is balanced by the opposing action of self-renewal factors. Upon loss of self-renewal factors, the action of NuRD is sufficient to silence transcription of these pluripotency genes, allowing cells to exit self-renewal. We propose that modulation of transcription levels by NuRD is key to maintaining the differentiation responsiveness of pluripotent cells.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsCell DifferentiationCell LineageCells, CulturedDNA-Binding ProteinsEmbryonic Stem CellsGenetic HeterogeneityMi-2 Nucleosome Remodeling and Deacetylase ComplexMiceMice, KnockoutPluripotent Stem CellsTranscription FactorsDNA-Binding ProteinsMbd3 protein, mouseMi-2 Nucleosome Remodeling and Deacetylase ComplexTranscription Factors

Identifiers

PMID22560079
PMCPMC3402183
OpenAlexW2126195570

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.