Evidence map›Paper›PMID 22559555›Full record

ArticleThe Review of scientific instruments2012

Development of a microbial high-throughput screening instrument based on elastic light scatter patterns.

Euiwon Bae, Valery Patsekin, Bartek Rajwa, Arun K Bhunia, Cheryl Holdman, V Jo Davisson, E Daniel Hirleman, J Paul Robinson

Open access · bronzeAbstract read
In one paragraph

Article in The Review of scientific instruments, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Identification of colonies of cultured shellfish-associatedCurrent research in microbial sciences · 2021
    Article
  3. Article
  4. How to build a time-gated luminescence microscope.Current protocols in cytometry · 2014
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Euiwon BaeSchool of Mechanical Engineering, Purdue University, West Lafayette, Indiana 47907, USA.
Valery Patsekin
Bartek Rajwa
Arun K Bhunia
Cheryl Holdman
V Jo Davisson
E Daniel Hirleman
J Paul Robinson
Purdue University West Lafayette · USUniversity of California, Merced · US

Funding

A distributed clinical & biodefense national network for rapid organism identificR56AI089511 · NIAID · PURDUE UNIVERSITY · PI BHUNIA, ARUN K, ROBINSON, JOSEPH PAUL · 2010 to 2010
$1.3M
NIAID NIH HHS 1R56AI089511-10NIAID NIH HHS R56 AI089511
6 · The paper itself

Abstract

A microbial high-throughput screening (HTS) system was developed that enabled high-speed combinatorial studies directly on bacterial colonies. The system consists of a forward scatterometer for elastic light scatter (ELS) detection, a plate transporter for sample handling, and a robotic incubator for automatic incubation. To minimize the ELS pattern-capturing time, a new calibration plate and correction algorithms were both designed, which dramatically reduced correction steps during acquisition of the circularly symmetric ELS patterns. Integration of three different control software programs was implemented, and the performance of the system was demonstrated with single-species detection for library generation and with time-resolved measurement for understanding ELS colony growth correlation, using Escherichia coli and Listeria. An in-house colony-tracking module enabled researchers to easily understand the time-dependent variation of the ELS from identical colony, which enabled further analysis in other biochemical experiments. The microbial HTS system provided an average scan time of 4.9 s per colony and the capability of automatically collecting more than 4000 ELS patterns within a 7-h time span.

Indexed as

ElasticityLightScattering, RadiationCalibrationCulture TechniquesEscherichia coliListeriaSoftwareTime Factors

Identifiers

PMID22559555
PMCPMC3339897
OpenAlexW1982681317

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.