Evidence map›Paper›PMID 22558405›Full record

ArticlePloS one2012

Genome-wide profiling identified a set of miRNAs that are differentially expressed in glioblastoma stem cells and normal neural stem cells.

Ming-Fei Lang, Su Yang, Chunnian Zhao, Guoqiang Sun, Kiyohito Murai, Xiwei Wu, Jinhui Wang, Hanlin Gao, Christine E Brown, Xiaoxuan Liu and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
11.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 109 citations in OpenAlex.

  1. Trial
  2. Review
  3. The Role of Estrogen in Brain MicroRNAs Regulation.Advanced pharmaceutical bulletin · 2024
    Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. Cancers · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
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  18. Article
  19. Review
  20. The Anticancer Activity of a First-in-class Small-molecule Targeting PCNA.Clinical cancer research : an official journal of the American Association for Cancer Research · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Ming-Fei LangDepartment of Neurosciences, Center for Gene Expression and Drug Discovery, Cancer Center, Beckman Research Institute of City of Hope, Duarte, California, USA.
Su Yang
Chunnian Zhao
Guoqiang Sun
Kiyohito Murai
Xiwei Wu
Jinhui Wang
Hanlin Gao
Christine E Brown
Xiaoxuan Liu
Jiehua Zhou
Ling Peng
John J Rossi
Yanhong Shi
City of Hope · USBeckman Research InstituteAix-Marseille Université · FRCentre Interdisciplinaire de Nanoscience de Marseille · FR

Funding

Orphan nuclear receptor TLX signaling in neural stem cellsR01NS059546 · NINDS · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI SHI, YANHONG · 2007 to 2010
$1.6M
Derivation of human pluripotent stem cells using small moleculesRC1NS068370 · NINDS · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI SHI, YANHONG · 2010 to 2010
$1.0M
NINDS NIH HHS R01 NS059546NINDS NIH HHS RC1 NS068370
6 · The paper itself

Abstract

A major challenge in cancer research field is to define molecular features that distinguish cancer stem cells from normal stem cells. In this study, we compared microRNA (miRNA) expression profiles in human glioblastoma stem cells and normal neural stem cells using combined microarray and deep sequencing analyses. These studies allowed us to identify a set of 10 miRNAs that are considerably up-regulated or down-regulated in glioblastoma stem cells. Among them, 5 miRNAs were further confirmed to have altered expression in three independent lines of glioblastoma stem cells by real-time RT-PCR analysis. Moreover, two of the miRNAs with increased expression in glioblastoma stem cells also exhibited elevated expression in glioblastoma patient tissues examined, while two miRNAs with decreased expression in glioblastoma stem cells displayed reduced expression in tumor tissues. Furthermore, we identified two oncogenes, NRAS and PIM3, as downstream targets of miR-124, one of the down-regulated miRNAs; and a tumor suppressor, CSMD1, as a downstream target of miR-10a and miR-10b, two of the up-regulated miRNAs. In summary, this study led to the identification of a set of miRNAs that are differentially expressed in glioblastoma stem cells and normal neural stem cells. Characterizing the role of these miRNAs in glioblastoma stem cells may lead to the development of miRNA-based therapies that specifically target tumor stem cells, but spare normal stem cells.

Indexed as

Gene Expression ProfilingGenomicsCell Line, TumorDown-RegulationGenes, Tumor SuppressorGlioblastomaHigh-Throughput Nucleotide SequencingHumansMicroRNAsNeoplastic Stem CellsNeural Stem CellsOligonucleotide Array Sequence AnalysisReproducibility of ResultsSequence Analysis, RNAUp-RegulationMicroRNAs

Identifiers

PMID22558405
PMCPMC3340364
OpenAlexW1996181208

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.