Evidence map›Paper›PMID 22558171›Full record

ArticlePloS one2012

A chemocentric approach to the identification of cancer targets.

Beáta Flachner, Zsolt Lörincz, Angelo Carotti, Orazio Nicolotti, Praveena Kuchipudi, Nikita Remez, Ferran Sanz, József Tóvári, Miklós J Szabó, Béla Bertók and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Target deconvolution techniques in modern phenotypic profiling.Current opinion in chemical biology · 2013
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Beáta FlachnerTargetEx, Dunakeszi, Hungary.
Zsolt Lörincz
Angelo Carotti
Orazio Nicolotti
Praveena Kuchipudi
Nikita Remez
Ferran Sanz
József Tóvári
Miklós J Szabó
Béla Bertók
Sándor Cseh
Jordi Mestres
György Dormán
Pompeu Fabra University · ESUniversity of Bari Aldo Moro · ITMunicipal Institute for Medical Research · ESNational Institute of Oncology · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel chemocentric approach to identifying cancer-relevant targets is introduced. Starting with a large chemical collection, the strategy uses the list of small molecule hits arising from a differential cytotoxicity screening on tumor HCT116 and normal MRC-5 cell lines to identify proteins associated with cancer emerging from a differential virtual target profiling of the most selective compounds detected in both cell lines. It is shown that this smart combination of differential in vitro and in silico screenings (DIVISS) is capable of detecting a list of proteins that are already well accepted cancer drug targets, while complementing it with additional proteins that, targeted selectively or in combination with others, could lead to synergistic benefits for cancer therapeutics. The complete list of 115 proteins identified as being hit uniquely by compounds showing selective antiproliferative effects for tumor cell lines is provided.

Indexed as

Models, BiologicalOncogenesAntineoplastic AgentsCell LineCell SurvivalComputer SimulationDrug Screening Assays, AntitumorGene Expression ProfilingGene Expression Regulation, NeoplasticHCT116 CellsHigh-Throughput Screening AssaysHumansInhibitory Concentration 50Neoplasm ProteinsSmall Molecule LibrariesAntineoplastic AgentsNeoplasm ProteinsSmall Molecule Libraries

Identifiers

PMID22558171
PMCPMC3338416
OpenAlexW2057023568

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.