Evidence map›Paper›PMID 22558144›Full record

ArticlePloS one2012

Gene expression changes in the prefrontal cortex, anterior cingulate cortex and nucleus accumbens of mood disorders subjects that committed suicide.

Adolfo Sequeira, Ling Morgan, David M Walsh, Preston M Cartagena, Prabhakara Choudary, Jun Li, Alan F Schatzberg, Stanley J Watson, Huda Akil, Richard M Myers and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 2 pooled it
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 2 syntheses or guidelines pooled it, 96 citations in OpenAlex.

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  17. Azepine-Indole Alkaloids FromFrontiers in neuroscience · 2022
    Article
  18. Review
  19. Rare protein-coding variants implicate genes involved in risk of suicide death.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 1 country.

Adolfo SequeiraDepartment of Psychiatry and Human Behavior, University of California Irvine, Irvine, California, United States of America. psequeir@uci.edu
Ling Morgan
David M Walsh
Preston M Cartagena
Prabhakara Choudary
Jun Li
Alan F Schatzberg
Stanley J Watson
Huda Akil
Richard M Myers
Edward G Jones
William E Bunney
Marquis P Vawter
University of California, Irvine · USUniversity of California, Davis · USUniversity of Michigan–Ann Arbor · USHudsonAlpha Institute for Biotechnology · USMichigan United · USStanford University · US

Funding

Mitochondrial Dysfunction In SchizophreniaR01MH085801 · NIMH · UNIVERSITY OF CALIFORNIA-IRVINE · PI VAWTER, MARQUIS PHILIP · 2009 to 2020
$5.0M
Metallothioneins and polyamines in major depression and suicideR01MH097082 · NIMH · UNIVERSITY OF CALIFORNIA-IRVINE · PI SEQUEIRA, ADOLFO · 2012 to 2015
$1.5M
NIMH NIH HHS R01 MH085801NIMH NIH HHS R01 MH097082
6 · The paper itself

Abstract

Suicidal behaviors are frequent in mood disorders patients but only a subset of them ever complete suicide. Understanding predisposing factors for suicidal behaviors in high risk populations is of major importance for the prevention and treatment of suicidal behaviors. The objective of this project was to investigate gene expression changes associated with suicide in brains of mood disorder patients by microarrays (Affymetrix HG-U133 Plus2.0) in the dorsolateral prefrontal cortex (DLPFC: 6 Non-suicides, 15 suicides), the anterior cingulate cortex (ACC: 6NS, 9S) and the nucleus accumbens (NAcc: 8NS, 13S). ANCOVA was used to control for age, gender, pH and RNA degradation, with P ≤ 0.01 and fold change ± 1.25 as criteria for significance. Pathway analysis revealed serotonergic signaling alterations in the DLPFC and glucocorticoid signaling alterations in the ACC and NAcc. The gene with the lowest p-value in the DLPFC was the 5-HT2A gene, previously associated both with suicide and mood disorders. In the ACC 6 metallothionein genes were down-regulated in suicide (MT1E, MT1F, MT1G, MT1H, MT1X, MT2A) and three were down-regulated in the NAcc (MT1F, MT1G, MT1H). Differential expression of selected genes was confirmed by qPCR, we confirmed the 5-HT2A alterations and the global down-regulation of members of the metallothionein subfamilies MT 1 and 2 in suicide completers. MTs 1 and 2 are neuro-protective following stress and glucocorticoid stimulations, suggesting that in suicide victims neuroprotective response to stress and cortisol may be diminished. Our results thus suggest that suicide-specific expression changes in mood disorders involve both glucocorticoids regulated metallothioneins and serotonergic signaling in different regions of the brain.

Indexed as

SuicideAdultAge FactorsAnalysis of VarianceCaliforniaFemaleGene Expression ProfilingGene Expression RegulationGyrus CinguliHumansHydrogen-Ion ConcentrationMaleMetallothioneinMicroarray AnalysisMiddle AgedMood DisordersMetallothioneinReceptor, Serotonin, 5-HT2A

Identifiers

PMID22558144
PMCPMC3340369
OpenAlexW2015205503

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.