Evidence map›Paper›PMID 22553336›Full record

ArticleJournal of virology2012

The human T-lymphotropic virus type 1 tax protein inhibits nonsense-mediated mRNA decay by interacting with INT6/EIF3E and UPF1.

Vincent Mocquet, Julia Neusiedler, Francesca Rende, David Cluet, Jean-Philippe Robin, Jean-Michel Terme, Madeleine Duc Dodon, Jürgen Wittmann, Christelle Morris, Hervé Le Hir and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 89 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Vincent MocquetLaboratoire de Biologie Moléculaire de la Cellule, Unité Mixte de Recherche 5239, Centre National de la Recherche Scientifique, Ecole Normale Supérieure de Lyon, Lyon, France.
Julia Neusiedler
Francesca Rende
David Cluet
Jean-Philippe Robin
Jean-Michel Terme
Madeleine Duc Dodon
Jürgen Wittmann
Christelle Morris
Hervé Le Hir
Vincenzo Ciminale
Pierre Jalinot
École Normale Supérieure de Lyon · FRLaboratoire de Biologie et Modélisation de la Cellule · FRUniversity of Padua · ITFriedrich-Alexander-Universität Erlangen-Nürnberg · DEInstitut de Biologie de l'École Normale Supérieure · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this report, we analyzed whether the degradation of mRNAs by the nonsense-mediated mRNA decay (NMD) pathway was affected in human T-lymphotropic virus type 1 (HTLV-1)-infected cells. This pathway was indeed strongly inhibited in C91PL, HUT102, and MT2 cells, and such an effect was also observed by the sole expression of the Tax protein in Jurkat and HeLa cells. In line with this activity, Tax binds INT6/EIF3E (here called INT6), which is a subunit of the translation initiation factor eukaryotic initiation factor 3 (eIF3) required for efficient NMD, as well as the NMD core factor upstream frameshift protein 1 (UPF1). It was also observed that Tax expression alters the morphology of processing bodies (P-bodies), the cytoplasmic structures which concentrate RNA degradation factors. The presence of UPF1 in these subcellular compartments was increased by Tax, whereas that of INT6 was decreased. In line with these effects, the level of the phosphorylated form of UPF1 was increased in the presence of Tax. Analysis of several mutants of the viral protein showed that the interaction with INT6 is necessary for NMD inhibition. The alteration of mRNA stability was observed to affect viral transcripts, such as that coding for the HTLV-1 basic leucine zipper factor (HBZ), and also several cellular mRNAs sensitive to the NMD pathway. Our data indicate that the effect of Tax on viral and cellular gene expression is not restricted to transcriptional control but can also involve posttranscriptional regulation.

Indexed as

RNA StabilityBasic-Leucine Zipper Transcription FactorsEukaryotic Initiation Factor-3Gene Products, taxHEK293 CellsHumansHuman T-lymphotropic virus 1Jurkat CellsRetroviridae ProteinsRNA HelicasesRNA, MessengerT-LymphocytesTrans-ActivatorsViral ProteinsBasic-Leucine Zipper Transcription FactorsEukaryotic Initiation Factor-3Gene Products, taxHBZ protein, human T-cell leukemia virus type IRetroviridae ProteinsRNA HelicasesRNA, Messengertax protein, Human T-lymphotrophic virus 1Trans-ActivatorsUPF1 protein, humanViral Proteins

Identifiers

PMID22553336
PMCPMC3416306
OpenAlexW1987050385

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.