Evidence map›Paper›PMID 22553329›Full record

ArticleJournal of virology2012

HIV-1 gp120 vaccine induces affinity maturation in both new and persistent antibody clonal lineages.

M Anthony Moody, Nicole L Yates, Joshua D Amos, Mark S Drinker, Joshua A Eudailey, Thaddeus C Gurley, Dawn J Marshall, John F Whitesides, Xi Chen, Andrew Foulger and 17 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 81 citations in OpenAlex.

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4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 3 institutions in 2 countries.

M Anthony MoodyDuke Human Vaccine Institute, Duke University Medical Center, Durham, NC, USA. moody007@mc.duke.edu
Nicole L Yates
Joshua D Amos
Mark S Drinker
Joshua A Eudailey
Thaddeus C Gurley
Dawn J Marshall
John F Whitesides
Xi Chen
Andrew Foulger
Jae-Sung Yu
Ruijun Zhang
R Ryan Meyerhoff
Robert Parks
Julia Cavanaugh Scull
Lu Wang
Nathan A Vandergrift
Joy Pickeral
Justin Pollara
Garnett Kelsoe
S Munir Alam
Guido Ferrari
David C Montefiori
Gerald Voss
Hua-Xin Liao
Georgia D Tomaras
Barton F Haynes
Duke Medical Center · USDuke University Hospital · USGlaxoSmithKline (Belgium) · BE

Funding

Viral Sequencing CoreU19AI067854 · NIAID · DUKE UNIVERSITY · PI CRUMP, JOHN ANDREW · 2006 to 2011
$290.5M
Ruth L. Kirschstein National Research Service Award (NRSA)- T32T32AI007392 · NIAID · DUKE UNIVERSITY · PI Amy Lynn Corneli, Guido Ferrari · 1990 to 2026
$9.8M
B-cell Tolerance and Humoral Immunity to HIV-1R01AI081579 · NIAID · DUKE UNIVERSITY · PI KELSOE, GARNETT H · 2009 to 2012
$1.6M
NIAID NIH HHS R01 AI081579NIAID NIH HHS T32 AI007392NIAID NIH HHS U19 AI067854
6 · The paper itself

Abstract

Most antibodies that broadly neutralize HIV-1 are highly somatically mutated in antibody clonal lineages that persist over time. Here, we describe the analysis of human antibodies induced during an HIV-1 vaccine trial (GSK PRO HIV-002) that used the clade B envelope (Env) gp120 of clone W6.1D (gp120(W6.1D)). Using dual-color antigen-specific sorting, we isolated Env-specific human monoclonal antibodies (MAbs) and studied the clonal persistence of antibodies in the setting of HIV-1 Env vaccination. We found evidence of V(H) somatic mutation induced by the vaccine but only to a modest level (3.8% ± 0.5%; range 0 to 8.2%). Analysis of 34 HIV-1-reactive MAbs recovered over four immunizations revealed evidence of both sequential recruitment of naïve B cells and restimulation of previously recruited memory B cells. These recombinant antibodies recapitulated the anti-HIV-1 activity of participant serum including pseudovirus neutralization and antibody-dependent cell-mediated cytotoxicity (ADCC). One antibody (3491) demonstrated a change in specificity following somatic mutation with binding of the inferred unmutated ancestor to a linear C2 peptide while the mutated antibody reacted only with a conformational epitope in gp120 Env. Thus, gp120(W6.1D) was strongly immunogenic but over four immunizations induced levels of affinity maturation below that of broadly neutralizing MAbs. Improved vaccination strategies will be needed to drive persistent stimulation of antibody clonal lineages to induce affinity maturation that results in highly mutated HIV-1 Env-reactive antibodies.

Indexed as

Antibody AffinityAIDS VaccinesAntibodies, MonoclonalAntibodies, NeutralizingAntibody-Dependent Cell CytotoxicityAntibody SpecificityB-LymphocytesHIV-1HIV AntibodiesHIV Envelope Protein gp120HumansImmunization ScheduleImmunoglobulin Variable RegionImmunologic MemoryVaccines, SubunitAIDS VaccinesAntibodies, MonoclonalAntibodies, NeutralizingHIV AntibodiesHIV Envelope Protein gp120Immunoglobulin Variable RegionVaccines, Subunit

Identifiers

PMID22553329
PMCPMC3416280
OpenAlexW2064612669

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.