Evidence map›Paper›PMID 22552229›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Detection of an autoreactive T-cell population within the polyclonal repertoire that undergoes distinct autoimmune regulator (Aire)-mediated selection.

Ruth T Taniguchi, Jason J DeVoss, James J Moon, John Sidney, Alessandro Sette, Marc K Jenkins, Mark S Anderson

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 106 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Aire in Autoimmunity.Annual review of immunology · 2024
    Review
  5. Peripheral T cell activation, not thymic selection, expands the T follicular helper repertoire in a lupus-prone murine model.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Ikaros is a principal regulator of AireScience immunology · 2023
    Article
  7. Article
  8. T cell deletional tolerance restricts AQP4 but not MOG CNS autoimmunity.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Review
  10. Review
  11. Review
  12. Infections in the monogenic autoimmune syndrome APECED.Current opinion in immunology · 2021
    Review
  13. Review
  14. Recent Advancements in Regenerative Approaches for Thymus Rejuvenation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2021
    Review
  15. Article
  16. Thymus and autoimmunity.Seminars in immunopathology · 2021
    Review
  17. Article
  18. Review
  19. Review
  20. Review

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Ruth T TaniguchiDiabetes Center, University of California, San Francisco, CA 94143, USA.
Jason J DeVoss
James J Moon
John Sidney
Alessandro Sette
Marc K Jenkins
Mark S Anderson
University of California, San Francisco · USLa Jolla Institute for Immunology · USHarvard University · USUniversity of Minnesota Medical Center · US

Funding

Pilot & Feasibility ProgramP30DK043351 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI RAYMOND T CHUNG · 1991 to 2026
$35.3M
Research BaseP30DK063720 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KRUMMEL, MATTHEW F · 2003 to 2019
$21.8M
Tetramer CoreU19AI095261 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI LUSTER, ANDREW D · 2011 to 2015
$10.8M
Aire-defieciency as a novel model of uveitisR01EY016408 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ANDERSON, MARK S · 2005 to 2013
$3.5M
NEI NIH HHS EY16408NEI NIH HHS R01 EY016408NIAID NIH HHS U19 AI095261NIDDK NIH HHS DK063720NIDDK NIH HHS P30 DK043351NIDDK NIH HHS P30 DK063720
6 · The paper itself

Abstract

The autoimmune regulator (Aire) plays a critical role in central tolerance by promoting the display of tissue-specific antigens in the thymus. To study the influence of Aire on thymic selection in a physiological setting, we used tetramer reagents to detect autoreactive T cells specific for the Aire-dependent tissue-specific antigen interphotoreceptor retinoid-binding protein (IRBP), in the polyclonal repertoire. Two class II tetramer reagents were designed to identify T cells specific for two different peptide epitopes of IRBP. Analyses of the polyclonal T-cell repertoire showed a high frequency of activated T cells specific for both IRBP tetramers in Aire(-/-) mice, but not in Aire(+/+) mice. Surprisingly, although one tetramer-binding T-cell population was efficiently deleted in the thymus in an Aire-dependent manner, the second tetramer-binding population was not deleted and could be detected in both the Aire(-/-) and Aire(+/+) T-cell repertoires. We found that Aire-dependent thymic deletion of IRBP-specific T cells relies on intercellular transfer of IRBP between thymic stroma and bone marrow-derived antigen-presenting cells. Furthermore, our data suggest that Aire-mediated deletion relies not only on thymic expression of IRBP, but also on proper antigen processing and presentation of IRBP by thymic antigen-presenting cells.

Indexed as

AIRE ProteinAnimalsAntigen-Presenting CellsClonal DeletionEye ProteinsImmunizationMiceMice, Inbred C57BLMice, KnockoutRetinol-Binding ProteinsRetinol-Binding Proteins, InterstitialStatistics, NonparametricThymus GlandT-LymphocytesTranscription FactorsUveitisAIRE ProteinEye ProteinsRetinol-Binding ProteinsRetinol-Binding Proteins, InterstitialTranscription Factors

Identifiers

PMID22552229
PMCPMC3356674
OpenAlexW2051479069

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.