Evidence map›Paper›PMID 22550304›Full record

ArticleCold Spring Harbor protocols2012

Fluorescent labeling of calmodulin with bifunctional rhodamine.

John F Beausang, Yujie Sun, Margot E Quinlan, Joseph N Forkey, Yale E Goldman

Open access · bronzeAbstract read
In one paragraph

Article in Cold Spring Harbor protocols, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Elongation factor G initiates translocation through a power stroke.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

John F Beausang
Yujie Sun
Margot E Quinlan
Joseph N Forkey
Yale E Goldman

Funding

Regulation and Mechano-Chemistry of Myosins V and VIP01AR051174 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI HOLZBAUR, ERIKA L · 2004 to 2008
$7.1M
StructuraL Dynamics of Actomyosin MotilityR01GM086352 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI GOLDMAN, YALE E · 2008 to 2016
$3.8M
STRUCTURAL DYNAMICS OF ACTOMYOSIN MOTILITYR01AR026846 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI GOLDMAN, YALE E · 1986 to 2007
$2.3M
KINETICS OF THE MUSCLE CONTRACTILE APPARATUSR37AR026846 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI GOLDMAN, YALE E · 1992 to 2001
$536k
NIAMS NIH HHS AR26846NIAMS NIH HHS AR51174NIAMS NIH HHS P01 AR051174NIAMS NIH HHS R01 AR026846NIAMS NIH HHS R37 AR026846NIGMS NIH HHS R01 GM086352
6 · The paper itself

Abstract

Polarized total internal reflection fluorescence microscopy (polTIRFM) can be used to detect the spatial orientation and rotational dynamics of single molecules. polTIRFM determines the three-dimensional angular orientation and the extent of wobble of a fluorescent probe bound to the macromolecule of interest. This protocol describes how to label chicken calmodulin (CaM) with bifunctional rhodamine (BR) at two engineered cysteine (Cys) residues (P66C and A73C) so that it cross-links the two Cys sites. The resulting BR-CaM protein is then purified by high-performance liquid chromatography (HPLC) and concentrated by filter centrifugation. To confirm that the two Cys residues in the labeled CaM are actually cross-linked by BR, a sample of purified BR-CaM is digested by an endoproteinase and analyzed by mass spectrometry. The BR-CaM can then be used to label myosin V, which can in turn be used in a polTIRFM processive motility assay.

Indexed as

AnimalsCalmodulinCentrifugationChickensChromatography, High Pressure LiquidCross-Linking ReagentsCysteineFluorescent DyesMicroscopy, FluorescenceMotionRhodaminesStaining and LabelingCalmodulinCross-Linking ReagentsCysteineFluorescent DyesRhodamines

Identifiers

PMID22550304
PMCPMC3852408
OpenAlexW1999033857

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.