Evidence map›Paper›PMID 22549882›Full record

ArticleThe Journal of biological chemistry2012

Structural, energetic, and mechanical perturbations in rhodopsin mutant that causes congenital stationary night blindness.

Shiho Kawamura, Alejandro T Colozo, Lin Ge, Daniel J Müller, Paul S-H Park

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Review
  3. Dark continuous noise from mutant G90D-rhodopsin predominantly underlies congenital stationary night blindness.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Review
  5. Article
  6. Article
  7. Light Dynamics of the Retinal-Disease-Relevant G90D Bovine Rhodopsin Mutant.Angewandte Chemie (International ed. in English) · 2020
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Dynamic single-molecule force spectroscopy of rhodopsin in native membranes.Methods in molecular biology (Clifton, N.J.) · 2015
    Article
  15. Article
  16. Review
  17. Constitutively active rhodopsin and retinal disease.Advances in pharmacology (San Diego, Calif.) · 2014
    Review
  18. Peptide transporter DtpA has two alternate conformations, one of which is promoted by inhibitor binding.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Shiho KawamuraDepartment of Biosystems Science and Engineering, ETH Zürich, 4058 Basel, Switzerland.
Alejandro T Colozo
Lin Ge
Daniel J Müller
Paul S-H Park
ETH Zurich · CHCase Western Reserve University · US

Funding

TISSUE CULTURE AND HYBRIDOMA MODULEP30EY011373 · NEI · CASE WESTERN RESERVE UNIVERSITY · PI Irina A Pikuleva · 1997 to 2026
$17.7M
PHOTOTRANSDUCTION IN HEALTH AND DISEASE - Administrative SupplementR01EY021731 · NEI · CASE WESTERN RESERVE UNIVERSITY · PI Paul S Park · 2011 to 2026
$6.5M
Towards a structural and temporal understanding of phototransductionR00EY018085 · NEI · CASE WESTERN RESERVE UNIVERSITY · PI PARK, PAUL S · 2008 to 2010
$825k
NEI NIH HHS P30 EY011373NEI NIH HHS P30EY011373NEI NIH HHS R00 EY018085NEI NIH HHS R00EY018085NEI NIH HHS R01 EY021731NEI NIH HHS R01EY021731
6 · The paper itself

Abstract

Several point mutations in rhodopsin cause retinal diseases including congenital stationary night blindness and retinitis pigmentosa. The mechanism by which a single amino acid residue substitution leads to dysfunction is poorly understood at the molecular level. A G90D point mutation in rhodopsin causes constitutive activity and leads to congenital stationary night blindness. It is unclear which perturbations the mutation introduces and how they can cause the receptor to be constitutively active. To reveal insight into these mechanisms, we characterized the perturbations introduced into dark state G90D rhodopsin from a transgenic mouse model expressing exclusively the mutant rhodopsin in rod photoreceptor cells. UV-visible absorbance spectroscopy revealed hydroxylamine accessibility to the chromophore-binding pocket of dark state G90D rhodopsin, which is not detected in dark state wild-type rhodopsin but is detected in light-activated wild-type rhodopsin. Single-molecule force spectroscopy suggested that the structural changes introduced by the mutation are small. Dynamic single-molecule force spectroscopy revealed that, compared with dark state wild-type rhodopsin, the G90D mutation decreased energetic stability and increased mechanical rigidity of most structural regions in the dark state mutant receptor. The observed structural, energetic, and mechanical changes in dark state G90D rhodopsin provide insights into the nature of perturbations caused by a pathological point mutation. Moreover, these changed properties observed for dark state G90D rhodopsin are consistent with properties expected for an active state.

Indexed as

Point MutationAmino Acid SequenceAnimalsEye Diseases, HereditaryGenetic Diseases, X-LinkedMiceMice, TransgenicMicroscopy, Atomic ForceMolecular Sequence DataMutationMyopiaNight BlindnessProtein Structure, SecondaryProtein Structure, TertiaryReceptors, G-Protein-CoupledRhodopsinReceptors, G-Protein-CoupledRhodopsin

Identifiers

PMID22549882
PMCPMC3381145
OpenAlexW1984326283

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.