Evidence map›Paper›PMID 22549466›Full record

ArticleThe EMBO journal2012

Threonine-4 of mammalian RNA polymerase II CTD is targeted by Polo-like kinase 3 and required for transcriptional elongation.

Corinna Hintermair, Martin Heidemann, Frederic Koch, Nicolas Descostes, Marta Gut, Ivo Gut, Romain Fenouil, Pierre Ferrier, Andrew Flatley, Elisabeth Kremmer and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 101 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
101citing papers in PubMed, 1 pooled it
8.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

101 citing papers in PubMed, 1 synthesis or guideline pooled it, 152 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. ThrScience advances · 2024
    Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article

41 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Corinna HintermairDepartment of Molecular Epigenetics, Helmholtz Center Munich, Center of Integrated Protein Science, Germany.
Martin Heidemann
Frederic Koch
Nicolas Descostes
Marta Gut
Ivo Gut
Romain Fenouil
Pierre Ferrier
Andrew Flatley
Elisabeth Kremmer
Rob D Chapman
Jean-Christophe Andrau
Dirk Eick
Centre d’Immunologie de Marseille-Luminy · FRCenter for Integrated Protein Science Munich · DECentro Nacional de Análisis Genómico · ESHelmholtz Zentrum München · DEHelmholtz Centre for Infection Research · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Eukaryotic RNA polymerase II (Pol II) has evolved an array of heptad repeats with the consensus sequence Tyr1-Ser2-Pro3-Thr4-Ser5-Pro6-Ser7 at the carboxy-terminal domain (CTD) of the large subunit (Rpb1). Differential phosphorylation of Ser2, Ser5, and Ser7 in the 5' and 3' regions of genes coordinates the binding of transcription and RNA processing factors to the initiating and elongating polymerase complexes. Here, we report phosphorylation of Thr4 by Polo-like kinase 3 in mammalian cells. ChIPseq analyses indicate an increase of Thr4-P levels in the 3' region of genes occurring subsequently to an increase of Ser2-P levels. A Thr4/Ala mutant of Pol II displays a lethal phenotype. This mutant reveals a global defect in RNA elongation, while initiation is largely unaffected. Since Thr4 replacement mutants are viable in yeast we conclude that this amino acid has evolved an essential function(s) in the CTD of Pol II for gene transcription in mammalian cells.

Indexed as

Gene Expression RegulationTranscription, GeneticAmino Acid SubstitutionAnimalsCell LineChromatin ImmunoprecipitationGene Expression ProfilingGenes, EssentialHumansMutagenesis, Site-DirectedPhosphorylationPolo-like KinasesProtein Serine-Threonine KinasesRNA Polymerase IIThreonineTumor Suppressor ProteinsPLK3 protein, humanPolo-like KinasesProtein Serine-Threonine KinasesRNA Polymerase IIThreonineTumor Suppressor Proteins

Identifiers

PMID22549466
PMCPMC3380212
OpenAlexW2114302771

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.