Evidence map›Paper›PMID 22547828›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

One influenza virus particle packages eight unique viral RNAs as shown by FISH analysis.

Yi-ying Chou, Reza Vafabakhsh, Sultan Doğanay, Qinshan Gao, Taekjip Ha, Peter Palese

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed
11.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 192 citations in OpenAlex.

  1. Article
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  4. Basic Virology.Advances in experimental medicine and biology · 2026
    Review
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  10. Article
  11. Article
  12. Review
  13. Review
  14. Fighting flu: novel CD8Clinical & translational immunology · 2024
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. High-throughput droplet-based analysis of influenza A virus genetic reassortment by single-virus RNA sequencing.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  20. Review

49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Yi-ying ChouDepartment of Microbiology, Mount Sinai School of Medicine, New York, NY 10029, USA.
Reza Vafabakhsh
Sultan Doğanay
Qinshan Gao
Taekjip Ha
Peter Palese
Icahn School of Medicine at Mount Sinai · USUniversity of Illinois Urbana-Champaign · USHoward Hughes Medical Institute · US

Funding

TRIM mediated host antiviral responses during influenza virus infectionsU19AI083025 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 2009 to 2013
$10.0M
Howard Hughes Medical InstituteNIAID NIH HHS HHSN266200700010CNIAID NIH HHS U19 AI083025NIAID NIH HHS U19AI083025
6 · The paper itself

Abstract

Influenza A virus possesses a segmented genome of eight negative-sense, single-stranded RNAs. The eight segments have been shown to be represented in approximately equal molar ratios in a virus population; however, the exact copy number of each viral RNA segment per individual virus particles has not been determined. We have established an experimental approach based on multicolor single-molecule fluorescent in situ hybridization (FISH) to study the composition of viral RNAs at single-virus particle resolution. Colocalization analysis showed that a high percentage of virus particles package all eight different segments of viral RNAs. To determine the copy number of each RNA segment within individual virus particles, we measured the photobleaching steps of individual virus particles hybridized with fluorescent probes targeting a specific viral RNA. By comparing the photobleaching profiles of probes against the HA RNA segment for the wild-type influenza A/Puerto Rico/8/34 (PR8) and a recombinant PR8 virus carrying two copies of the HA segment, we concluded that only one copy of HA segment is packaged into a wild type virus particle. Our results showed similar photobleaching behaviors for other RNA segments, suggesting that for the majority of the virus particles, only one copy of each RNA segment is packaged into one virus particle. Together, our results support that the packaging of influenza viral genome is a selective process.

Indexed as

Cell LineDNA Copy Number VariationsElectrophoresis, Polyacrylamide GelFluorescent DyesHemagglutinins, ViralHumansInfluenza A virusIn Situ Hybridization, FluorescencePhotobleachingRNA, ViralVirionVirus AssemblyFluorescent DyesHemagglutinins, ViralRNA, Viral

Identifiers

PMID22547828
PMCPMC3384215
OpenAlexW2086102429

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.