Evidence map›Paper›PMID 22547678›Full record

ArticleMolecular and cellular biology2012

IκB kinase α phosphorylation of TRAF4 downregulates innate immune signaling.

Jill M Marinis, Jessica E Hutti, Craig R Homer, Brian A Cobb, Lewis C Cantley, Christine McDonald, Derek W Abbott

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 34 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. 14-3-3ζ suppresses RANKL signaling by destabilizing TRAF6.The Journal of biological chemistry · 2024
    Article
  7. Article
  8. Article
  9. Review
  10. Molecular Characterization of Nine TRAF Genes in Yellow Catfish (International journal of molecular sciences · 2023
    Article
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Nucleotide-binding oligomerization domain 1 and gastrointestinal disorders.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2017
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Jill M MarinisDepartment of Pathology, Case Western Reserve University School of Medicine, Cleveland, Ohio, USA.
Jessica E Hutti
Craig R Homer
Brian A Cobb
Lewis C Cantley
Christine McDonald
Derek W Abbott
Case Western Reserve University · USCleveland Clinic · USBeth Israel Deaconess Medical Center · USUNC Lineberger Comprehensive Cancer CenterUniversity School · US

Funding

Clinical and Translational Science Collaborative of ClevelandUL1TR000439 · NCATS · CASE WESTERN RESERVE UNIVERSITY · PI KONSTAN, MICHAEL W. · 2012 to 2016
$50.0M
Ubiquitination Pathways Mediating Chronic Intestinal InflammationP01DK091222 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI COMINELLI, FABIO · 2011 to 2020
$16.5M
PROTEIN KINASE SIGNALING PATHWAYSR01GM056203 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI CANTLEY, LEWIS C. · 1997 to 2012
$4.5M
Innate Immune Signal Transduction Specificity in Inflammatory DiseaseR01GM086550 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI ABBOTT, DEREK W · 2009 to 2020
$3.8M
Autophagy and Nod2 Function in Crohn's DiseaseR01DK082437 · NIDDK · CLEVELAND CLINIC LERNER COM-CWRU · PI MCDONALD, CHRISTINE L · 2009 to 2013
$1.6M
NCATS NIH HHS UL1 TR000439NIDDK NIH HHS P01 DK091222NIDDK NIH HHS P01DK091222NIDDK NIH HHS R01 DK082437NIDDK NIH HHS R01DK082437NIGMS NIH HHS R01 GM056203NIGMS NIH HHS R01GM056203NIGMS NIH HHS R01 GM086550NIGMS NIH HHS R01GM86550-01
6 · The paper itself

Abstract

Despite their homology, IκB kinase α (IKKα) and IKKβ have divergent roles in NF-κB signaling. IKKβ strongly activates NF-κB while IKKα can downregulate NF-κB under certain circumstances. Given this, identifying independent substrates for these kinases could help delineate their divergent roles. Peptide substrate array technology followed by bioinformatic screening identified TRAF4 as a substrate for IKKα. Like IKKα, TRAF4 is atypical within its family because it is the only TRAF family member to negatively regulate innate immune signaling. IKKα's phosphorylation of serine-426 on TRAF4 was required for this negative regulation. Binding to the Crohn's disease susceptibility protein, NOD2, is required for TRAF4 phosphorylation and subsequent inhibition of NOD2 signaling. Structurally, serine-426 resides within an exaggerated β-bulge in TRAF4 that is not present in the other TRAF proteins, and phosphorylation of this site provides a structural basis for the atypical function of TRAF4 and its atypical role in NOD2 signaling.

Indexed as

Immunity, InnateAmino Acid SequenceAnimalsBase SequenceBinding SitesCell LineCrohn DiseaseDNA PrimersDown-RegulationHCT116 CellsHEK293 CellsHumansI-kappa B KinaseMiceModels, MolecularMolecular Sequence DataChuk protein, mouseDNA PrimersI-kappa B KinaseNF-kappa BNOD2 protein, humanNod2 protein, mouseNod2 Signaling Adaptor ProteinPeptide LibraryRecombinant Fusion ProteinsSerineTNF Receptor-Associated Factor 4TRAF4 protein, humanTraf4 protein, mouse

Identifiers

PMID22547678
PMCPMC3434482
OpenAlexW2163993295

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.