Evidence map›Paper›PMID 22547550›Full record

ArticleInfection and immunity2012

VirK is a periplasmic protein required for efficient secretion of plasmid-encoded toxin from enteroaggregative Escherichia coli.

Gabriela Tapia-Pastrana, Lucia Chavez-Dueñas, Humberto Lanz-Mendoza, Ken Teter, Fernando Navarro-García

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  8. Review
  9. Review
  10. Transcriptomic Analysis ofMolecules (Basel, Switzerland) · 2019
    Article
  11. Curcumin Blocks Cytotoxicity of Enteroaggregative and EnteropathogenicFrontiers in cellular and infection microbiology · 2019
    Article
  12. Article
  13. The Periplasmic Chaperone Network ofFrontiers in microbiology · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Gabriela Tapia-PastranaDepartment of Cell Biology, Centro de Investigación y de Estudios Avanzados del IPN-CINVESTAV-IPN, México DF, Mexico.
Lucia Chavez-Dueñas
Humberto Lanz-Mendoza
Ken Teter
Fernando Navarro-García
Center for Research and Advanced Studies of the National Polytechnic Institute · MXInstituto Nacional de Salud Pública · MXUniversity of Central Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite the autotransporter (AT) moniker, AT secretion appears to involve the function of periplasmic chaperones. We identified four periplasmic proteins that specifically bound to plasmid-encoded toxin (Pet), an AT produced by enteroaggregative Escherichia coli (EAEC). These proteins include the 17-kDa Skp chaperone and the 37-kDa VirK protein. We found that the virK gene is present in different Enterobacteriaceae. VirK bound to misfolded conformations of the Pet passenger domain, but it did not bind to the folded passenger domain or to the β domain of Pet. Assays with an EAECΔvirK mutant and its complemented version showed that, in the absence of VirK, Pet was not secreted but was instead retained in the periplasm as proteolytic fragments. In contrast, Pet was secreted from a Δskp mutant. VirK was not required for the insertion of porin proteins into the outer membrane but assisted with insertion of the Pet β domain into the outer membrane. Loss of VirK function blocked the EAEC-mediated cytotoxic effect against HEp-2 cells. Thus, VirK facilitates the secretion of the AT Pet by maintaining the passenger domain in a conformation that both avoids periplasmic proteolysis and facilitates β-domain insertion into the outer membrane.

Indexed as

Bacterial ToxinsCell LineEnterotoxinsEscherichia coliEscherichia coli ProteinsGene DeletionGenetic Complementation TestHepatocytesHumansMolecular WeightPeriplasmic ProteinsProtein FoldingSerine EndopeptidasesBacterial ToxinsEnterotoxinsEscherichia coli ProteinsPeriplasmic ProteinsPet protein, E coliSerine EndopeptidasesVirK protein, E coli

Identifiers

PMID22547550
PMCPMC3416465
OpenAlexW2171752829

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.