Evidence map›Paper›PMID 22545925›Full record

ArticleBMC plant biology2012

Genome-wide association mapping of flowering time and northern corn leaf blight (Setosphaeria turcica) resistance in a vast commercial maize germplasm set.

Delphine Van Inghelandt, Albrecht E Melchinger, Jean-Pierre Martinant, Benjamin Stich

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Article in BMC plant biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

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34citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

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  8. Frontiers in microbiology · 2023
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  11. Frontiers in plant science · 2022
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  14. Intercontinental trials reveal stable QTL for Northern corn leaf blight resistance in Europe and in Brazil.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

4 authors.

Delphine Van InghelandtInstitute of Plant Breeding, Seed Science, and Population Genetics, University of Hohenheim, Germany.
Albrecht E Melchinger
Jean-Pierre Martinant
Benjamin Stich

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSetosphaeria turcica is a fungal pathogen that causes northern corn leaf blight (NCLB) which is a serious foliar disease in maize. In order to unravel the genetic architecture of the resistance against this disease, a vast association mapping panel comprising 1487 European maize inbred lines was used to (i) identify chromosomal regions affecting flowering time (FT) and northern corn leaf blight (NCLB) resistance, (ii) examine the epistatic interactions of the identified chromosomal regions with the genetic background on an individual molecular marker basis, and (iii) dissect the correlation between NCLB resistance and FT.

resultsThe single marker analyses performed for 8 244 single nucleotide polymorphism (SNP) markers revealed seven, four, and four SNP markers significantly (α=0.05, amplicon wise Bonferroni correction) associated with FT, NCLB, and NCLB resistance corrected for FT, respectively. These markers explained individually between 0.36 and 14.29% of the genetic variance of the corresponding trait.

conclusionsThe very well interpretable pattern of SNP associations observed for FT suggested that data from applied plant breeding programs can be used to dissect polygenic traits. This in turn indicates that the associations identified for NCLB resistance might be successfully used in marker-assisted selection programs. Furthermore, the associated genes are also of interest for further research concerning the mechanism of resistance to NCLB and plant diseases in general, because some of the associated genes have not been mentioned in this context so far.

Indexed as

Chromosome MappingGenome-Wide Association StudyAscomycotaDisease ResistanceEpistasis, GeneticFlowersGenotypeInbreedingPhenotypePlant DiseasesPlant LeavesPolymorphism, Single NucleotideRegression AnalysisSeedsTime FactorsZea mays

Identifiers

PMID22545925
PMCPMC3511189

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.