Evidence map›Paper›PMID 22545084›Full record

ArticlePloS one2012

Analysis of Tp53 codon 72 polymorphisms, Tp53 mutations, and HPV infection in cutaneous squamous cell carcinomas.

Keith R Loeb, Maryam M Asgari, Stephen E Hawes, Qinghua Feng, Joshua E Stern, Mingjun Jiang, Zsolt B Argenyi, Ethel-Michele de Villiers, Nancy B Kiviat

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 2 pooled it
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 2 syntheses or guidelines pooled it, 19 citations in OpenAlex.

  1. Genetic association between p53 codon 72 polymorphism and risk of cutaneous squamous cell carcinoma.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. HPV disease transmission protection and control.Microbial cell (Graz, Austria) · 2016
    Review
  9. p53 Arg72Pro polymorphism and risk of basal cell carcinoma: a meta analysis.International journal of clinical and experimental medicine · 2015
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Keith R LoebDivision of Clinical Research, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Maryam M Asgari
Stephen E Hawes
Qinghua Feng
Joshua E Stern
Mingjun Jiang
Zsolt B Argenyi
Ethel-Michele de Villiers
Nancy B Kiviat
University of Washington · USChinese Academy of Medical Sciences Dermatology Hospital · CNGerman Cancer Research Center · DE

Funding

Epidemiology of HPV and p53 Mutations in NM Skin CancerR01CA084087 · NCI · UNIVERSITY OF WASHINGTON · PI KIVIAT, NANCY B. · 2001 to 2005
$2.7M
A SYNTHETIC LETHAL STRATEGY TARGETING ANEUPLOID CELLSK08ES000382 · NIEHS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI LOEB, KEITH R · 2000 to 2004
$614k
The role of HPV in squamous cell carcinomaF32AR047552 · NIAMS · UNIVERSITY OF WASHINGTON · PI ASGARI, MARYAM MANDANA · 2000 to 2002
$99k
NCI NIH HHS R01 CA084087NIAMS NIH HHS F32 AR047552NIAMS NIH HHS F32 AR47552NIEHS NIH HHS K08 ES000382NIEHS NIH HHS K08-ES00382
6 · The paper itself

Abstract

backgroundNon-melanoma skin cancers are one of the most common human malignancies accounting for 2-3% of tumors in the US and represent a significant health burden. Epidemiology studies have implicated Tp53 mutations triggered by UV exposure, and human papilloma virus (HPV) infection to be significant causes of non-melanoma skin cancer. However, the relationship between Tp53 and cutaneous HPV infection is not well understood in skin cancers. In this study we assessed the association of HPV infection and Tp53 polymorphisms and mutations in lesional specimens with squamous cell carcinomas.

methodsWe studied 55 cases of histologically confirmed cutaneous squamous cell carcinoma and 41 controls for the presence of HPV infection and Tp53 genotype (mutations and polymorphism).

resultsWe found an increased number of Tp53 mutations in the squamous cell carcinoma samples compared with perilesional or control samples. There was increased frequency of homozygous Tp53-72R polymorphism in cases with squamous cell carcinomas, while the Tp53-72P allele (Tp53-72R/P and Tp53-72P/P) was more frequent in normal control samples. Carcinoma samples positive for HPV showed a decreased frequency of Tp53 mutations compared to those without HPV infection. In addition, carcinoma samples with a Tp53-72P allele showed an increased incidence of Tp53 mutations in comparison carcinomas samples homozygous for Tp53-72R.

conclusionsThese studies suggest there are two separate pathways (HPV infection and Tp53 mutation) leading to cutaneous squamous cell carcinomas stratified by the Tp53 codon-72 polymorphism. The presence of a Tp53-72P allele is protective against cutaneous squamous cell carcinoma, and carcinoma specimens with Tp53-72P are more likely to have Tp53 mutations. In contrast Tp53-72R is a significant risk factor for cutaneous squamous cell carcinoma and is frequently associated with HPV infection instead of Tp53 mutations. Heterozygosity for Tp53-72R/P is protective against squamous cell carcinomas, possibly reflecting a requirement for both HPV infection and Tp53 mutations.

Indexed as

AgedAged, 80 and overCarcinoma, Squamous CellCodonDNA, ViralFemaleGenotypeHumansMutationPapillomaviridaePapillomavirus InfectionsPolymorphism, GeneticSkinSkin NeoplasmsTumor Suppressor Protein p53CodonDNA, ViralTumor Suppressor Protein p53

Identifiers

PMID22545084
PMCPMC3335843
OpenAlexW2172260302

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.