Evidence map›Paper›PMID 22544737›Full record

ArticleThe Journal of biological chemistry2012

The dormancy regulator DosR controls ribosome stability in hypoxic mycobacteria.

Andrej Trauner, Kathryn E A Lougheed, Mark H Bennett, Suzanne M Hingley-Wilson, Huw D Williams

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 102 citations in OpenAlex.

  1. Ribosome hibernation in zinc-starvedMicrobiology spectrum · 2026
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  4. From colonisation to chronicity: adaptation ofMicrobiology (Reading, England) · 2026
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  7. The effects of silver nitrate onFrontiers in public health · 2025
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  12. Hibernating ribosomes as drug targets?Frontiers in microbiology · 2024
    Review
  13. Review
  14. MnoSR removal inFrontiers in cellular and infection microbiology · 2024
    Article
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  16. Dynamic Transcriptional Landscape ofInternational journal of molecular sciences · 2023
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  19. Microorganisms · 2022
    Review
  20. Bidirectional sequestration between a bacterial hibernation factor and a glutamate metabolizing protein.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Andrej TraunerDivision of Cell and Molecular Biology, Department of Life Sciences, Imperial College London, London SW7 2AZ, United Kingdom.
Kathryn E A Lougheed
Mark H Bennett
Suzanne M Hingley-Wilson
Huw D Williams
Imperial College London · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

It is thought that during latent infection, Mycobacterium tuberculosis bacilli are retained within granulomas in a low-oxygen environment. The dormancy survival (Dos) regulon, regulated by the response regulator DosR, appears to be essential for hypoxic survival in M. tuberculosis, but it is not known how the regulon promotes survival. Here we report that mycobacteria, in contrast to enteric bacteria, do not form higher-order structures (e.g. ribosomal dimers) upon entry into stasis. Instead, ribosomes are stabilized in the associated form (70S). Using a strategy incorporating microfluidic, proteomic, and ribosomal profiling techniques to elucidate the fate of mycobacterial ribosomes during hypoxic stasis, we show that the dormancy regulator DosR is required for optimal ribosome stabilization. We present evidence that the majority of this effect is mediated by the DosR-regulated protein MSMEG_3935 (a S30AE domain protein), which is associated with the ribosome under hypoxic conditions. A Δ3935 mutant phenocopies the ΔdosR mutant during hypoxia, and complementation of ΔdosR with the MSMEG_3935 gene leads to complete recovery of dosR mutant phenotypes during hypoxia. We suggest that this protein is named ribosome-associated factor under hypoxia (RafH) and that it is the major factor responsible for DosR-mediated hypoxic survival in mycobacteria.

Indexed as

AnaerobiosisBacterial ProteinsDNA-Binding ProteinsGene Expression Regulation, BacterialGenetic Complementation TestMicrobial ViabilityMutationMycobacterium smegmatisProtein KinasesProteomicsRegulonRibosomal ProteinsRibosomesRNA, BacterialRNA, RibosomalRNA StabilityBacterial ProteinsDNA-Binding ProteinsDosR protein, Mycobacterium tuberculosisProtein KinasesRibosomal ProteinsRNA, BacterialRNA, Ribosomal

Identifiers

PMID22544737
PMCPMC3390679
OpenAlexW2048964173

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.