Evidence map›Paper›PMID 22544659›Full record

ArticleAmerican journal of medical genetics. Part A2012

Candidate locus analysis for PHACE syndrome.

Sheri Mitchell, Dawn H Siegel, Joseph T C Shieh, David A Stevenson, J Fredrik Grimmer, Tracey Lewis, Denise Metry, Ilona Frieden, Francine Blei, Hulya Kayserili and 2 more

Erratum issuedAbstract readCase Reports
In one paragraph

Article in American journal of medical genetics. Part A, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Arterial Spin-Labeling Perfusion for PHACE Syndrome.AJNR. American journal of neuroradiology · 2021
    Article
  4. Review
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 2 countries.

Sheri MitchellARUP Institute for Clinical and Experimental Pathology, Salt Lake City, Utah 84108, USA.
Dawn H Siegel
Joseph T C Shieh
David A Stevenson
J Fredrik Grimmer
Tracey Lewis
Denise Metry
Ilona Frieden
Francine Blei
Hulya Kayserili
Beth A Drolet
Pinar Bayrak-Toydemir
ARUP Institute for Clinical and Experimental PathologyMedical College of Wisconsin · USUniversity of San Francisco · USBaylor College of Medicine · USIstanbul University · TRUniversity of Utah · USVascular Institute of New York · US

Funding

OREGON CLINICAL AND TRANSLATIONAL SCIENCE INSTITUTEUL1RR024140 · NCRR · OREGON HEALTH & SCIENCE UNIVERSITY · PI ORWOLL, ERIC S. · 2006 to 2011
$61.1M
Oregon Clinical and Translational Research InstituteUL1TR000128 · NCATS · OREGON HEALTH & SCIENCE UNIVERSITY · PI ELLISON, DAVID H · 2012 to 2015
$28.7M
UNIVERSITY OF UTAH CENTER FOR CLINICAL AND TRANSLATIONAL SCIENCE-UL1: BPCAUL1RR025764 · NCRR · UNIVERSITY OF UTAH · PI MCCLAIN, DONALD A. · 2008 to 2011
$19.4M
Osseous Abnormalities in Neurofibromatosis Type 1K23NS052500 · NINDS · UNIVERSITY OF UTAH · PI STEVENSON, DAVID ANDREW · 2005 to 2009
$880k
Role of MicroRNA-499 in the HeartK08HL092970 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SHIEH, JOSEPH T · 2009 to 2013
$627k
EXTRAMURAL RESEARCH FACILITIES CONSTRUCTIONC06RR011234 · NCRR · UNIVERSITY OF UTAH · PI MATSEN, JOHN M · 1995 to 1995
–
NCATS NIH HHS UL1 TR000128NCRR NIH HHS C06 RR011234NCRR NIH HHS UL1 RR024140NCRR NIH HHS UL1 RR024140 01NCRR NIH HHS UL1 RR025764NCRR NIH HHS UL1-RR025764NHLBI NIH HHS K08 HL092970NINDS NIH HHS K23 NS052500
6 · The paper itself

Abstract

PHACE syndrome (OMIM #606519) is a neurocutaneous syndrome of unknown etiology and pathogenesis. We report on an individual with PHACE syndrome with a complete deletion of SLC35B4 on 7q33. In order to further analyze this region, SLC35B4 was sequenced for 33 individuals with PHACE syndrome and one parental set. Common polymorphisms with a possible haplotype but no disease causing mutation were identified. Sixteen of 33 samples of the PHACE syndrome patients were also analyzed for copy number variations using high-resolution oligo-comparative genomic hybridization (CGH) microarray. A second individual in this cohort had a 26.5 kb deletion approximately 80 kb upstream of SLC35B4 with partial deletion of the AKR1B1 on 7q33. The deletions observed on 7q33 are not likely the singular cause of PHACE syndrome; however, it is possible that this region provides a genetic susceptibility to phenotypic expression with other confounding genetic or environmental factors.

Indexed as

Chromosome DeletionChromosomes, Human, Pair 7Aldehyde ReductaseAortic CoarctationDNA Copy Number VariationsEye AbnormalitiesGenetic LociHumansNeurocutaneous SyndromesNucleotide Transport ProteinsAKR1B1 protein, humanAldehyde ReductaseNucleotide Transport ProteinsSLC35B4 protein, human

Identifiers

PMID22544659
PMCPMC3356486
OpenAlexW2012110118

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.