Evidence map›Paper›PMID 22543870›Full record

ArticleThe EMBO journal2012

The inner membrane histidine kinase EnvZ senses osmolality via helix-coil transitions in the cytoplasm.

Loo Chien Wang, Leslie K Morgan, Pahan Godakumbura, Linda J Kenney, Ganesh S Anand

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 80 papers.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 128 citations in OpenAlex.

  1. How Salmonella Works Under Osmotic and Desiccation Stresses.Comprehensive reviews in food science and food safety · 2026
    Review
  2. HXMS: a standardized file format for HX-MS data.Bioinformatics (Oxford, England) · 2026
    Article
  3. Article
  4. Emergence of antiphage functions from random sequence libraries reveals mechanisms of gene birth.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. HXMS: a standardized file format for HX/MS data.bioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Analysis of stress-induced small proteins inbioRxiv : the preprint server for biology · 2025
    Article
  11. Direct sensing of host ferric iron by an archetype histidine kinase mediates virulence of an enteric pathogen.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  12. Article
  13. Effects of pleiotropicJournal of bacteriology · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Microbiology spectrum · 2024
    Article
  19. Identification of a dCache-type chemoreceptor inFrontiers in microbiology · 2024
    Article
  20. Article

20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Loo Chien WangDepartment of Biological Sciences, National University of Singapore, Singapore, Singapore.
Leslie K Morgan
Pahan Godakumbura
Linda J Kenney
Ganesh S Anand
University of Illinois Chicago · USNational University of Singapore · SG

Funding

MOLECULAR CHARACTERIZATION OF PORIN GENE REGULATIONR01GM058746 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KENNEY, LINDA J. · 2000 to 2010
$2.3M
OmpR and SsrB Regulation of Salmonella VirulenceI01BX000372 · VA · JESSE BROWN VA MEDICAL CENTER · PI KENNEY, LINDA J. · 2009 to 2017
–
BLRD VA I01 BX000372NIGMS NIH HHS GM-058746NIGMS NIH HHS R01 GM058746
6 · The paper itself

Abstract

Two-component systems mediate bacterial signal transduction, employing a membrane sensor kinase and a cytoplasmic response regulator (RR). Environmental sensing is typically coupled to gene regulation. Understanding how input stimuli activate kinase autophosphorylation remains obscure. The EnvZ/OmpR system regulates expression of outer membrane proteins in response to osmotic stress. To identify EnvZ conformational changes associated with osmosensing, we used HDXMS to probe the effects of osmolytes (NaCl, sucrose) on the cytoplasmic domain of EnvZ (EnvZ(c)). Increasing osmolality decreased deuterium exchange localized to the four-helix bundle containing the autophosphorylation site (His(243)). EnvZ(c) exists as an ensemble of multiple conformations and osmolytes favoured increased helicity. High osmolality increased autophosphorylation of His(243), suggesting that these two events are linked. In-vivo analysis showed that the cytoplasmic domain of EnvZ was sufficient for osmosensing, transmembrane domains were not required. Our results challenge existing claims of robustness in EnvZ/OmpR and support a model where osmolytes promote intrahelical H-bonding enhancing helix stabilization, increasing autophosphorylation and downstream signalling. The model provides a conserved mechanism for signalling proteins that respond to diverse physical and mechanical stimuli.

Indexed as

Bacterial Outer Membrane ProteinsBase SequenceCytoplasmEscherichia coli ProteinsGene DeletionHistidineMultienzyme ComplexesMutationOsmolar ConcentrationProtein Structure, SecondarySignal TransductionSodium ChlorideSucroseBacterial Outer Membrane ProteinsenvZ protein, E coliEscherichia coli ProteinsHistidineMultienzyme ComplexesSodium ChlorideSucrose

Identifiers

PMID22543870
PMCPMC3365433
OpenAlexW2127377891

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.