Evidence map›Paper›PMID 22542183›Full record

ArticleNeuron2012

De novo gene disruptions in children on the autistic spectrum.

Ivan Iossifov, Michael Ronemus, Dan Levy, Zihua Wang, Inessa Hakker, Julie Rosenbaum, Boris Yamrom, Yoon-Ha Lee, Giuseppe Narzisi, Anthony Leotta and 25 more

Abstract read
In one paragraph

Article in Neuron, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 902 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
902citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

902 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Article
  7. Aberrant Neural Entrainment to Word-Level Speech Patterns in Fragile X Syndrome: Evidence for a Statistical Learning Deficit.Autism research : official journal of the International Society for Autism Research · 2026
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Translational pediatrics · 2026
    Article
  15. Article
  16. Article
  17. Longitudinal Characterization of GiantResearch (Washington, D.C.) · 2026
    Article
  18. Review
  19. Article
  20. A De Novo Loss-of-FunctionChildren (Basel, Switzerland) · 2025
    Article

842 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

35 authors.

Ivan IossifovCold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA.
Michael Ronemus
Dan Levy
Zihua Wang
Inessa Hakker
Julie Rosenbaum
Boris Yamrom
Yoon-Ha Lee
Giuseppe Narzisi
Anthony Leotta
Jude Kendall
Ewa Grabowska
Beicong Ma
Steven Marks
Linda Rodgers
Asya Stepansky
Jennifer Troge
Peter Andrews
Mitchell Bekritsky
Kith Pradhan
Elena Ghiban
Melissa Kramer
Jennifer Parla
Ryan Demeter
Lucinda L Fulton
Robert S Fulton
Vincent J Magrini
Kenny Ye
Jennifer C Darnell
Robert B Darnell
Elaine R Mardis
Richard K Wilson
Michael C Schatz
W Richard McCombie
Michael Wigler

Funding

IDENTIFICATION OF FMRP TARGET RNASR01HD040647 · NICHD · ROCKEFELLER UNIVERSITY · PI DARNELL, JENNIFER C · 2001 to 2017
$4.5M
Deep sequencing of autism candidate genes in 2000 families from the Simons SimpleRC2MH090028 · NIMH · COLD SPRING HARBOR LABORATORY · PI MCCOMBIE, WILLIAM RICHARD, WIGLER, MICHAEL H · 2009 to 2010
$2.8M
NICHD NIH HHS R01 HD040647NIMH NIH HHS 5RC2MH090028-02NIMH NIH HHS RC2 MH090028
6 · The paper itself

Abstract

Exome sequencing of 343 families, each with a single child on the autism spectrum and at least one unaffected sibling, reveal de novo small indels and point substitutions, which come mostly from the paternal line in an age-dependent manner. We do not see significantly greater numbers of de novo missense mutations in affected versus unaffected children, but gene-disrupting mutations (nonsense, splice site, and frame shifts) are twice as frequent, 59 to 28. Based on this differential and the number of recurrent and total targets of gene disruption found in our and similar studies, we estimate between 350 and 400 autism susceptibility genes. Many of the disrupted genes in these studies are associated with the fragile X protein, FMRP, reinforcing links between autism and synaptic plasticity. We find FMRP-associated genes are under greater purifying selection than the remainder of genes and suggest they are especially dosage-sensitive targets of cognitive disorders.

Indexed as

Genetic Predisposition to DiseaseChildChild Development Disorders, PervasiveChild, PreschoolFamily HealthFemaleFragile X Messenger Ribonucleoprotein 1Gene DosageGenetic Association StudiesHumansMaleModels, MolecularMutationParentsPhenotypeFMR1 protein, humanFragile X Messenger Ribonucleoprotein 1

Identifiers

PMID22542183
PMCPMC3619976

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.