Evidence map›Paper›PMID 22541813›Full record

ArticleBiosensors & bioelectronics

Label-free, multiplexed detection of bacterial tmRNA using silicon photonic microring resonators.

Ott Scheler, Jared T Kindt, Abraham J Qavi, Lauris Kaplinski, Barry Glynn, Thomas Barry, Ants Kurg, Ryan C Bailey

Open access · bronzeAbstract read
In one paragraph

Article in Biosensors & bioelectronics. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
7.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Cytokines: From Clinical Significance to Quantification.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2021
    Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Biomedical optics express · 2017
    Article
  13. Article
  14. Whispering gallery mode sensors.Advances in optics and photonics · 2015
    Article
  15. Article
  16. Review
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Ott SchelerDepartment of Biotechnology, Institute of Molecular and Cellular Biology, University of Tartu, Tartu, Estonia.
Jared T Kindt
Abraham J Qavi
Lauris Kaplinski
Barry Glynn
Thomas Barry
Ants Kurg
Ryan C Bailey
University of Illinois Urbana-Champaign · USUniversity of Tartu · EEOllscoil na Gaillimhe – University of Galway · IE

Funding

Personalized Clinical Diagnostics and Beyond: Integrated Ring Resonator ArraysDP2OD002190 · OD · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI BAILEY, RYAN C · 2007 to 2009
$2.4M
NIH HHS 1-DP2-OD002190-01NIH HHS DP2 OD002190
6 · The paper itself

Abstract

A label-free biosensing method for the sensitive detection and identification of bacterial transfer-messenger RNA (tmRNA) is presented employing arrays of silicon photonic microring resonators. Species specific tmRNA molecules are targeted by complementary DNA capture probes that are covalently attached to the sensor surface. Specific hybridization is monitored in near real-time by observing the resonance wavelength shift of each individual microring. The sensitivity of the biosensing platform allowed for detection down to 53 fmol of Streptococcus pneumoniae tmRNA, equivalent to approximately 3.16×10(7) CFU of bacteria. The simplicity and scalability of this biosensing approach makes it a promising tool for the rapid identification of different bacteria via tmRNA profiling.

Indexed as

Biosensing TechniquesDNA, ComplementaryDNA, Single-StrandedLimit of DetectionPhotonsRNA, BacterialSiliconStreptococcus pneumoniaeDNA, ComplementaryDNA, Single-StrandedRNA, BacterialSilicontmRNA

Identifiers

PMID22541813
PMCPMC3367093
OpenAlexW2077889490

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.