Evidence map›Paper›PMID 22539970›Full record

ArticlePloS one2012

Mutational analysis of Cvab, an ABC transporter involved in the secretion of active colicin V.

Kai-Hui Wu, Ying-Hsin Hsieh, Phang C Tai

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Prevalence and activity of class II microcins inApplied and environmental microbiology · 2026
    Article
  2. Article
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  7. Article
  8. Evidence for Widespread Class II Microcins inApplied and environmental microbiology · 2022
    Article
  9. Article
  10. Biosynthesis and secretion of the microbial sulfated peptide RaxX and binding to the rice XA21 immune receptor.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  11. Secretome of obligate intracellular Rickettsia.FEMS microbiology reviews · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kai-Hui WuDepartment of Biology, Georgia State University, Atlanta, Georgia, United States of America.
Ying-Hsin Hsieh
Phang C Tai
Georgia State University · US

Funding

PROTEIN TRANSLOCATION &EXPORT IN GRAM-NEGATIVE BACTERIAR01GM034766 · NIGMS · GEORGIA STATE UNIVERSITY · PI TAI, PHANG C. · 1985 to 2005
$2.5M
NIGMS NIH HHS GM34766NIGMS NIH HHS R01 GM034766
6 · The paper itself

Abstract

CvaB is the central membrane transporter of the colicin V secretion system that belongs to an ATP-binding cassette superfamily. Previous data showed that the N-terminal and C-terminal domains of CvaB are essential for the function of CvaB. N-terminal domain of CvaB possesses Ca(2+)-dependent cysteine proteolytic activity, and two critical residues, Cys32 and His105, have been identified. In this study, we also identify Asp121 as being the third residue of the putative catalytic triad within the active site of the enzyme. The Asp121 mutants lose both their colicin V secretion activity and N-terminal proteolytic activity. The adjacent residue Pro122 also appears to play a critical role in the colicin V secretion. However, the reversal of the two residues D121P - P122D results in loss of activity. Based on molecular modeling and protein sequence alignment, several residues adjacent to the critical residues, Cys32 and His105, were also examined and characterized. Site-directed mutagenesis of Trp101, Asp102, Val108, Leu76, Gly77, and Gln26 indicate that the neighboring residues around the catalytic triad affect colicin V secretion. Several mutated CvaB proteins with defective secretion were also tested, including Asp121 and Pro122, and were found to be structurally stable. These results indicate that the residues surrounding the identified catalytic triad are functionally involved in the secretion of biologically active colicin V.

Indexed as

Amino Acid SequenceATP-Binding Cassette TransportersCatalytic DomainColicinsEscherichia coliEscherichia coli ProteinsMolecular Sequence DataMutagenesis, Site-DirectedProtein Structure, TertiarySequence AlignmentATP-Binding Cassette TransportersColicinsCvaB protein, E coliEscherichia coli Proteins

Identifiers

PMID22539970
PMCPMC3335142
OpenAlexW1991388966

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.