Evidence map›Paper›PMID 22539872›Full record

ArticleMolecular vision2012

Study of a US cohort supports the role of ZNF644 and high-grade myopia susceptibility.

Khanh-Nhat Tran-Viet, Elizabeth St Germain, Vincent Soler, Caldwell Powell, Sing-Hui Lim, Thomas Klemm, Seang Mei Saw, Terri L Young

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Myopia Genetics and Heredity.Children (Basel, Switzerland) · 2022
    Review
  3. IMI - Report on Experimental Models of Emmetropization and Myopia.Investigative ophthalmology & visual science · 2019
    Review
  4. Evaluation ofEye and vision (London, England) · 2019
    Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Oxidative stress in myopia.Oxidative medicine and cellular longevity · 2015
    Review
  13. Article
  14. Advances in the genomics of common eye diseases.Human molecular genetics · 2013
    Review
  15. Review
  16. Article
  17. Pakistan journal of medical sciences
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Khanh-Nhat Tran-VietThe Center for Human Genetics, Duke University Medical Center, Durham, NC 27710, USA.
Elizabeth St Germain
Vincent Soler
Caldwell Powell
Sing-Hui Lim
Thomas Klemm
Seang Mei Saw
Terri L Young
Duke University · US

Funding

The Molecular Genetics of High MyopiaR01EY014685 · NEI · UNIVERSITY OF WISCONSIN-MADISON · PI YOUNG, TERRI LOIS · 2003 to 2017
$8.1M
NEI NIH HHS EY014685NEI NIH HHS R01 EY014685
6 · The paper itself

Abstract

purposeMyopia, or nearsightedness, is highly prevalent in Asian countries and is considered a serious public health issue globally. High-grade myopia can predispose individuals to myopic maculopathy, premature cataracts, retinal detachment, and glaucoma. A recent study implicated zinc finger protein 644 isoform 1 (ZNF644) variants with non-syndromic high-grade myopia in a Chinese-Asian population. Herein we focused on investigating the role for ZNF644 variants in high-grade myopia in a United States (US) cohort.

methodsDNA from a case cohort of 131 subject participants diagnosed with high-grade myopia was screened for ZNF644 variants. Spherical refractive error of -≤-6.00 diopters (D) in at least one eye was defined as affected. All coding, intron/exon boundaries were screened using Sanger sequencing. Single nucleotide allele frequencies were determined by screening 672 ethnically matched controls.

resultsSequencing analysis did not detect previously reported mutations. However, our analysis identified 2 novel single nucleotide variants (c.725C>T, c.821A>T) in 2 high-grade myopia individuals- one Caucasian and one African American, respectively. These variants were not found in normal controls. A rare variant - dbsSNP132 (rs12117237→c.2119A>G) - with a minor allele frequency of 0.2% was present in 6 additional cases, but was also present in 5 controls.

conclusionsOur study has identified two novel variants in ZNF644 associated with high-grade myopia in a US cohort. Our results suggest that ZNF644 may play a role in myopia development.

Indexed as

Polymorphism, Single NucleotideBase SequenceBlack or African AmericanBlack PeopleCase-Control StudiesCohort StudiesExonsEyeFemaleGene FrequencyGenetic Predisposition to DiseaseHumansIntronsMaleMolecular Sequence DataMyopiaCBLL2 protein, humanTrans-ActivatorsUbiquitin-Protein Ligases

Identifiers

PMID22539872
PMCPMC3335780
OpenAlexW1511574524

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.