Evidence map›Paper›PMID 22539610›Full record

ReviewBriefings in functional genomics2012

Evolution of animal Piwi-interacting RNAs and prokaryotic CRISPRs.

M Senthil Kumar, Kevin C Chen

Abstract readReview
In one paragraph

Review in Briefings in functional genomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. The Role of microRNAs in Inflammation.International journal of molecular sciences · 2022
    Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

M Senthil KumarGenome Institute of Singapore.
Kevin C Chen

Funding

Genome-wide identification of cis-regulatory polymorphisms in S. cerevisiaeR00HG004515 · NHGRI · RUTGERS, THE STATE UNIV OF N.J. · PI CHEN, KEVIN · 2009 to 2011
$747k
NHGRI NIH HHS R00HG004515
6 · The paper itself

Abstract

Piwi-interacting RNAs (piRNAs) and CRISPR RNAs (crRNAs) are two recently discovered classes of small noncoding RNA that are found in animals and prokaryotes, respectively. Both of these novel RNA species function as components of adaptive immune systems that protect their hosts from foreign nucleic acids-piRNAs repress transposable elements in animal germlines, whereas crRNAs protect their bacterial hosts from phage and plasmids. The piRNA and CRISPR systems are nonhomologous but rather have independently evolved into logically similar defense mechanisms based on the specificity of targeting via nucleic acid base complementarity. Here we review what is known about the piRNA and CRISPR systems with a focus on comparing their evolutionary properties. In particular, we highlight the importance of several factors on the pattern of piRNA and CRISPR evolution, including the population genetic environment, the role of alternate defense systems and the mechanisms of acquisition of new piRNAs and CRISPRs.

Indexed as

AnimalsBiological EvolutionCaenorhabditis elegansDatabases, GeneticDrosophila melanogasterEvolution, MolecularHumansImmune SystemModels, BiologicalModels, GeneticModels, TheoreticalNucleic AcidsPhenotypeProkaryotic CellsRNARNA, Small InterferingNucleic AcidsRNARNA, Small Interfering

Identifiers

PMID22539610
PMCPMC3398257

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.