Evidence map›Paper›PMID 22538847›Full record

ArticleNature protocols2012

Microneedle-based analysis of the micromechanics of the metaphase spindle assembled in Xenopus laevis egg extracts.

Yuta Shimamoto, Tarun M Kapoor

Open access · greenAbstract read
In one paragraph

Article in Nature protocols, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 38 citations in OpenAlex.

  1. Basement membrane structure and function: Relating biology to mechanics.Matrix biology : journal of the International Society for Matrix Biology · 2025
    Review
  2. Article
  3. Review
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  5. Peroxidasin is required for full viability in development and for maintenance of tissue mechanics in adults.Matrix biology : journal of the International Society for Matrix Biology · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Chromatin as a nuclear spring.Biophysics and physicobiology · 2018
    Review
  13. Article
  14. Article
  15. High-quality frozen extracts ofMolecular biology of the cell · 2017
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yuta ShimamotoLaboratory of Chemistry and Cell Biology, The Rockefeller University, New York, New York, USA.
Tarun M Kapoor
Rockefeller University · US

Funding

Motor Protein Dynamics and Mitotic MechanismsR01GM065933 · NIGMS · ROCKEFELLER UNIVERSITY · PI KAPOOR, TARUN M. · 2002 to 2018
$6.7M
NIGMS NIH HHS GM065933NIGMS NIH HHS R01 GM065933
6 · The paper itself

Abstract

To explain how micrometer-sized cellular structures generate and respond to forces, we need to characterize their micromechanical properties. Here we provide a protocol to build and use a dual force-calibrated microneedle-based setup to quantitatively analyze the micromechanics of a metaphase spindle assembled in Xenopus laevis egg extracts. This cell-free extract system allows for controlled biochemical perturbations of spindle components. We describe how the microneedles are prepared and how they can be used to apply and measure forces. A multimode imaging system allows the tracking of microtubules, chromosomes and needle tips. This setup can be used to analyze the viscoelastic properties of the spindle on timescales ranging from minutes to sub-seconds. A typical experiment, along with data analysis, is also detailed. We anticipate that our protocol can be readily extended to analyze the micromechanics of other cellular structures assembled in cell-free extracts. The entire procedure can take 3-4 d.

Indexed as

AnimalsBiomechanical PhenomenaCell ExtractsCell-Free SystemCytological TechniquesSpindle ApparatusXenopus laevisCell Extracts

Identifiers

PMID22538847
PMCPMC4117203
OpenAlexW2014341213

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.