Evidence map›Paper›PMID 22536152›Full record

ArticlePLoS pathogens2012

Loss of anti-viral immunity by infection with a virus encoding a cross-reactive pathogenic epitope.

Alex T Chen, Markus Cornberg, Stephanie Gras, Carole Guillonneau, Jamie Rossjohn, Andrew Trees, Sebastien Emonet, Juan C de la Torre, Raymond M Welsh, Liisa K Selin

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
10.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 40 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Virological and Immunological Outcomes of Coinfections.Clinical microbiology reviews · 2018
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Vaccination and heterologous immunity: educating the immune system.Transactions of the Royal Society of Tropical Medicine and Hygiene · 2015
    Review
  15. Article
  16. Article
  17. Article
  18. Preexisting CD8+ T-cell immunity to the H7N9 influenza A virus varies across ethnicities.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  19. Article
  20. Heterologous ("nonspecific") and sex-differential effects of vaccines: epidemiology, clinical trials, and emerging immunologic mechanisms.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Alex T ChenDepartment of Pathology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America.
Markus Cornberg
Stephanie Gras
Carole Guillonneau
Jamie Rossjohn
Andrew Trees
Sebastien Emonet
Juan C de la Torre
Raymond M Welsh
Liisa K Selin
University of Massachusetts Chan Medical School · USScripps Research Institute · USMonash University · AUUniversity of Melbourne · AU

Funding

Tetramer CoreP01AI049320 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LUZURIAGA, KATHERINE F · 2001 to 2016
$22.3M
Immunity and Virus DiseaseR37AI017672 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI WELSH, RAYMOND M · 2004 to 2013
$4.0M
IMMUNITY IN SYSTEMIC AND MUCOSAL VIRUS INFECTIONSR01AI046578 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI SELIN, LIISA KAARINA · 2000 to 2009
$3.1M
REVERSE GENETICS OF ARENAVIRUSESR01AI047140 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI DE LA TORRE, JUAN C. · 2001 to 2011
$3.0M
Virus induced immunopathologyR01AI081675 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI WELSH, RAYMOND M · 2009 to 2013
$2.0M
Targeting the processing of the arenavirus glycoprotein for anti-viral therapy.R01AI079665 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI DE LA TORRE, JUAN C. · 2009 to 2012
$1.9M
Anti-interferon Activity of the Arenavirus NucleoproteinR01AI077719 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI DE LA TORRE, JUAN C., MARTINEZ-SOBRIDO, LUIS · 2009 to 2012
$1.6M
IMMUNITY AND VIRUS DISEASER01AI017672 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI WELSH, RAYMOND M · 1985 to 2003
$1.4M
Anti-interferon Activity of the Arenavirus NucleoproteinR56AI077719 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI DE LA TORRE, JUAN C., MARTINEZ-SOBRIDO, LUIS · 2008 to 2008
$471k
Reverse Genetics of ArenavirusesR56AI047140 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI DE LA TORRE, JUAN C. · 2007 to 2007
$398k
INTERCELLULAR SIGNALS AND INTESTINAL AGANGLIONOSISR01DK052530 · NIDDK · UNIVERSITY OF WASHINGTON · PI KAPUR, RAJ P. · 1997 to 2000
$241k
NIAID NIH HHS AI017672NIAID NIH HHS AI046578NIAID NIH HHS AI047140NIAID NIH HHS AI077719NIAID NIH HHS AI079665NIAID NIH HHS AI081675NIAID NIH HHS P01 AI049320NIAID NIH HHS R01 AI017672NIAID NIH HHS R01 AI046578NIAID NIH HHS R01 AI047140NIAID NIH HHS R01 AI077719NIAID NIH HHS R01 AI079665NIAID NIH HHS R01 AI081675NIAID NIH HHS R37 AI017672NIAID NIH HHS R56 AI047140NIAID NIH HHS R56 AI077719NIDDK NIH HHS DK52530
6 · The paper itself

Abstract

T cell cross-reactivity between different strains of the same virus, between different members of the same virus group, and even between unrelated viruses is a common occurrence. We questioned here how an intervening infection with a virus containing a sub-dominant cross-reactive T cell epitope would affect protective immunity to a previously encountered virus. Pichinde virus (PV) and lymphocytic choriomeningitis virus (LCMV) encode subdominant cross-reactive NP₂₀₅₋₂₁₂ CD8 T cell epitopes sharing 6 of 8 amino acids, differing only in the MHC anchoring regions. These pMHC epitopes induce cross-reactive but non-identical T cell receptor (TCR) repertoires, and structural studies showed that the differing anchoring amino acids altered the conformation of the MHC landscape presented to the TCR. PV-immune mice receiving an intervening infection with wild type but not NP205-mutant LCMV developed severe immunopathology in the form of acute fatty necrosis on re-challenge with PV, and this pathology could be predicted by the ratio of NP205-specific to the normally immunodominant PV NP₃₈₋₄₅-specific T cells. Thus, cross-reactive epitopes can exert pathogenic properties that compromise protective immunity by impairing more protective T cell responses.

Indexed as

AnimalsCD8-Positive T-LymphocytesCross ReactionsEpitopes, T-LymphocyteLymphocytic ChoriomeningitisLymphocytic choriomeningitis virusMaleMiceMutationPichinde virusReceptors, Antigen, T-CellViral ProteinsEpitopes, T-LymphocyteReceptors, Antigen, T-CellViral Proteins

Identifiers

PMID22536152
PMCPMC3334890
OpenAlexW2146319796

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.