Evidence map›Paper›PMID 22535319›Full record

ArticleMolecular biology reports2012

Cloning and characterization of SCIRR69: a novel transcriptional factor belonging to the CREB/ATF family.

Zhenlian Ma, Haiping Que, Yanli Ni, Haiyan Huang, Yong Liu, Tao Liu, Xin Li, Qihong Sun, Shaojun Liu

Abstract read
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In one paragraph

Article in Molecular biology reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Zhenlian MaInstitute of Basic Medical Sciences, 27 Taiping Road, Beijing 100850, People's Republic of China.
Haiping Que
Yanli Ni
Haiyan Huang
Yong Liu
Tao Liu
Xin Li
Qihong Sun
Shaojun Liu
Institute of Physiology and Basic Medicine · RUChina Medical University · TWInstitute of Basic Medical Sciences of the Chinese Academy of Medical SciencesTaiping Hospital · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The complete cDNA sequence of a novel gene, SCIRR69 (spinal cord injury and regeneration related no. 69 gene), was obtained by RACE technique. It codes for a protein of 521 amino acid residues homologous to human CREB3l2 (also known as BBF2H7) and mouse CREB3l2. The protein contains a basic DNA binding and leucine zipper dimerization (B-ZIP) motif and a hydrophobic region representing a putative transmembrane domain, similar to the structure of other CREB/ATF transcription factors. Monoclonal antibody against SCIRR69 was developed and could recognize the SCIRR69 protein in both native and denatured forms. Constructing of SCIRR69 fusion proteins with the GAL4 DNA-binding domain disclosed that SCIRR69 functioned as a transcriptional activator and its N-terminal 60 amino acids accounted for the activation ability. SCIRR69 resides in the cytoplasm of primary neurons, whereas neuron damage by incision led to the cleavage and translocation from the cytoplasm to the nucleus. These results suggest that SCIRR69 is activated by proteolytic cleavage at the transmembrane domain in response to neuron damage and its amino-terminal cytoplasmic domain translocates into the nucleus to activate the transcription of target genes.

Indexed as

Activating Transcription FactorsAmino Acid SequenceAnimalsAntibodies, MonoclonalBase SequenceCells, CulturedCloning, MolecularCREB-Binding ProteinDNA-Binding ProteinsRatsRats, WistarSequence Analysis, DNATranscription FactorsActivating Transcription FactorsAntibodies, MonoclonalCreb3l2 protein, ratCREB-Binding ProteinDNA-Binding ProteinsTranscription Factors

Identifiers

PMID22535319
OpenAlexW2044720472

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.